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LOCUS HQ377433 2562 bp RNA linear VRL 21-JAN-2011
DEFINITION HIV-1 isolate subject_485_week48_clone 38 from Brazil envelope
glycoprotein (env) gene, complete cds
ACCESSION HQ377433
VERSION HQ377433.1 GI:317407981
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 2562)
Show all sequences for reference 1
AUTHORS McNicholas,P.M., Mann,P.A., Bsc,L.W., Phd,P.Q., Lee,E.,
McCarthy,M., Shen,J., Black,T.A. and Strizki,J.M.
TITLE Mapping and Characterization of Vicriviroc Resistance Mutations
From HIV-1 Isolated from Treatment-Experienced Subjects Enrolled in
a Phase II Study (VICTOR-E1).
JOURNAL J. Acquir. Immune Defic. Syndr.. 56(3); 222-9 (2011)
PUBMED 21209592
REFERENCE 2 (bases 1 to 2562)
Show all sequences for reference 2
AUTHORS McNicholas,P.M. and Strizki,J.
TITLE Direct Submission
JOURNAL Submitted (06-OCT-2010) Department of Infectious Diseases, Merck,
2015 Galloping Hill Road, Kenilworth, NJ 07033, USA
FEATURES Location/Qualifiers
source 1..2562
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="subject_485_week48_clone 38"
/host="Homo sapiens"
/db_xref="taxon:11676"
/country="Brazil"
/collection_date="Sep-2007"
gene 1..2562
/gene="env"
CDS 1..2562
/gene="env"
/note="gp160"
/codon_start="1"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="ADV17524.1"
/db_xref="GI:317407982"
/translation="MRVRGMQRNWQHLGTWGLLFLGVLIICKATQQMWVTVYYGVPVW
KEATTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEVDLVNVTENFNMWKNNMVEQ
MHEDIISLWDQSLKPCVKLTPLCVTLDCKDVNITKSNGTVNITNVNTTSWPQMQAGEI
KNCSFNISTDIRDKVRKEYALFYNLDVVKIEGGNSTSYRLVSCNTSVLTQACPKVSFE
PIPIHYCAPAGFAILKCKDKEFNGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEG
VVIRSENFTNNAKTIIVQLNKSVVINCTRPNNNTRRSIPIGPGSAFYATGDIIGDIRQ
AHCNISGIEWNNTLKQISTKLRKQFNRTIAFRQSSGGDPEVVMHSFICRGEFFYCNTS
QLFNWNDTTGSIHTNGTITLPCRIKQIVNMWQGVGKAMYAPPIRGLINCTSNITGLLL
TRDGGEENRTTETFRPQGGNMRDNWRSELYKYKVVKIEPLGIAPTKAKRRVVQREKRA
IGVIGAMFLGFLGIAGSTMGAASLTLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLT
VWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICTTAVPWNTSWSNKSYDQIWGNMT
WMQWEREIDNYTGLIYSLIEESQIQQEKNEQDLLSLDQWASLWNWFDISNWLSYIEIF
IMIVGGLIGLRIVFAVLSIINRVRQGYSPLSFQTHLPARRGPDRPEGTEEDGGERDRD
TSRPLVGGFLAIIWVDLRSLCLFSYHRLRDLLLIVTRTVELLGRRGWELLKYCWNILQ
YWSQELKNSAISLLNTTAIAVAEGTDRIIEALQRIGRAILNIPRRIRQGLERALL"
BASE COUNT 888 a 449 c 604 g 621 t
ORIGIN
1 atgagagtga gggggatgca gaggaattgg cagcacttgg ggacatgggg cctcttattc
61 ttgggggtgt taataatatg taaggctacg caacagatgt gggttacagt ctattatggg
121 gtacctgtgt ggaaagaagc aaccactact ctattttgtg catcagatgc taaagcatat
181 gatacagagg tacataatgt ctgggccaca catgcttgtg tacccacaga ccccaaccca
241 caagaagtag acttggtaaa tgtgacagaa aattttaata tgtggaaaaa taacatggta
301 gaacaaatgc atgaggatat aattagttta tgggatcaaa gcctaaaacc atgtgtaaaa
361 ttaaccccgc tctgtgttac cttagattgc aaagatgtga atattactaa aagcaatggt
421 actgtcaaca ttactaacgt gaatactact agctggccac aaatgcaagc aggagaaata
481 aaaaattgct ctttcaatat tagcacagac ataagagata aggtgcggaa agaatatgca
541 cttttttata accttgatgt agtaaaaata gaagggggga atagtactag ctataggttg
601 gtaagttgta acacctcagt ccttacacag gcctgtccaa aggtatcctt tgagccaatt
661 cccatacatt attgtgcccc ggctggtttt gcgattctaa agtgtaaaga taaggagttc
721 aatggaacag gaccatgtac aaatgtcagc acagtacaat gtacacatgg aattagacca
781 gtagtgtcaa ctcaactgct attaaatggc agtctagcag aagaaggggt agtaattaga
841 tccgaaaatt tcacaaacaa tgctaaaacc ataatagtac agctgaataa atctgtagta
901 attaattgca caagacctaa caacaataca agaaggagta tacctatagg accaggcagt
961 gcattttatg caacaggaga tataatagga gatataagac aagcacattg taacattagt
1021 ggaatagaat ggaacaacac attaaaacaa ataagtacaa aactaagaaa acaatttaac
1081 agaacaatag cctttaggca atcctcagga ggggacccag aagttgtaat gcacagtttt
1141 atttgtagag gggaattttt ctactgtaat acatctcaac tgttcaattg gaatgatact
1201 acagggtcaa ttcacactaa tggaactatc acactcccat gcagaataaa acaaattgta
1261 aacatgtggc agggagtagg aaaagcaatg tatgcccctc ccatcagagg actaattaac
1321 tgtacatcaa atattacagg gctgctatta acaagagatg gtggtgaaga gaacaggacc
1381 accgagacct ttagacctca aggaggaaat atgagagaca attggagaag tgaattatat
1441 aaatataaag tagtaaaaat tgaaccacta ggaatagcac ccaccaaggc aaagcgaaga
1501 gtggtgcaaa gggaaaaaag agcaataggg gtaataggag ctatgttcct tgggttcttg
1561 ggaatagcag gaagcactat gggcgcagcg tcactgacgc tgacggtaca ggccagacaa
1621 ttattgtctg gtatagtgca acagcagaac aatttgctga gagctattga ggcgcaacaa
1681 catctgttgc aactcacagt ctggggtatc aagcagctcc aggcaagagt cctggctgtg
1741 gaaagatacc taagggatca acagctcctg ggaatttggg gttgctctgg aaagctcatt
1801 tgcaccactg ctgtgccttg gaatactagt tggagtaata aatcttatga tcagatttgg
1861 gggaatatga catggatgca atgggaaaga gaaattgata attacacagg cttaatatac
1921 agcttaattg aagaatcgca aatccaacaa gaaaagaatg aacaagactt attgtcatta
1981 gatcaatggg caagtttgtg gaattggttt gacatatcaa actggctatc gtatatagaa
2041 atattcataa tgatagtagg gggcttaata ggtttaagaa tagtttttgc tgtactttct
2101 ataataaata gagttaggca gggatactca cccttatcgt tccagaccca cctcccagcc
2161 aggaggggac ccgacaggcc cgaaggaacc gaagaagacg gtggagagag agacagagac
2221 acatccagac cattagtggg tggattctta gcaatcatct gggtcgacct gcggagcctg
2281 tgcctcttca gctaccaccg cttgagagac ttactcttga ttgtaacgag gactgtggaa
2341 ctgctgggac gcagggggtg ggaactcctc aaatattgct ggaacatcct acagtattgg
2401 agtcaggaac taaagaatag tgctattagc ttgcttaata ccacagcaat agcagtggct
2461 gaggggacag acagaattat agaagctttg caaagaattg gaagagctat cctcaatata
2521 cctaggagaa taagacaggg cttggaaagg gctttgctat aa
//
last modified: Tue May 31 10:56 2022