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LOCUS	    HQ377433		    2562 bp    RNA     linear	VRL 21-JAN-2011
DEFINITION  HIV-1 isolate subject_485_week48_clone 38 from Brazil envelope
	    glycoprotein (env) gene, complete cds
ACCESSION   HQ377433
VERSION     HQ377433.1 GI:317407981
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 2562)
            Show all sequences for reference 1
  AUTHORS   McNicholas,P.M., Mann,P.A., Bsc,L.W., Phd,P.Q., Lee,E.,
	    McCarthy,M., Shen,J., Black,T.A. and Strizki,J.M.
  TITLE     Mapping and Characterization of Vicriviroc Resistance Mutations
	    From HIV-1 Isolated from Treatment-Experienced Subjects Enrolled in
	    a Phase II Study (VICTOR-E1).
  JOURNAL   J. Acquir. Immune Defic. Syndr.. 56(3); 222-9 (2011)
  PUBMED    21209592
REFERENCE   2 (bases 1 to 2562)
            Show all sequences for reference 2
  AUTHORS   McNicholas,P.M. and Strizki,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-OCT-2010) Department of Infectious Diseases, Merck,
	    2015 Galloping Hill Road, Kenilworth, NJ 07033, USA
FEATURES             Location/Qualifiers
     source	     1..2562
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="subject_485_week48_clone 38"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="Brazil"
		     /collection_date="Sep-2007"
     gene	     1..2562
		     /gene="env"
     CDS	     1..2562
		     /gene="env"
		     /note="gp160"
		     /codon_start="1"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="ADV17524.1"
		     /db_xref="GI:317407982"
		     /translation="MRVRGMQRNWQHLGTWGLLFLGVLIICKATQQMWVTVYYGVPVW
		     KEATTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEVDLVNVTENFNMWKNNMVEQ
		     MHEDIISLWDQSLKPCVKLTPLCVTLDCKDVNITKSNGTVNITNVNTTSWPQMQAGEI
		     KNCSFNISTDIRDKVRKEYALFYNLDVVKIEGGNSTSYRLVSCNTSVLTQACPKVSFE
		     PIPIHYCAPAGFAILKCKDKEFNGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEG
		     VVIRSENFTNNAKTIIVQLNKSVVINCTRPNNNTRRSIPIGPGSAFYATGDIIGDIRQ
		     AHCNISGIEWNNTLKQISTKLRKQFNRTIAFRQSSGGDPEVVMHSFICRGEFFYCNTS
		     QLFNWNDTTGSIHTNGTITLPCRIKQIVNMWQGVGKAMYAPPIRGLINCTSNITGLLL
		     TRDGGEENRTTETFRPQGGNMRDNWRSELYKYKVVKIEPLGIAPTKAKRRVVQREKRA
		     IGVIGAMFLGFLGIAGSTMGAASLTLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLT
		     VWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICTTAVPWNTSWSNKSYDQIWGNMT
		     WMQWEREIDNYTGLIYSLIEESQIQQEKNEQDLLSLDQWASLWNWFDISNWLSYIEIF
		     IMIVGGLIGLRIVFAVLSIINRVRQGYSPLSFQTHLPARRGPDRPEGTEEDGGERDRD
		     TSRPLVGGFLAIIWVDLRSLCLFSYHRLRDLLLIVTRTVELLGRRGWELLKYCWNILQ
		     YWSQELKNSAISLLNTTAIAVAEGTDRIIEALQRIGRAILNIPRRIRQGLERALL"
BASE COUNT	888 a	 449 c	  604 g    621 t
ORIGIN
       1 atgagagtga gggggatgca gaggaattgg cagcacttgg ggacatgggg cctcttattc 
      61 ttgggggtgt taataatatg taaggctacg caacagatgt gggttacagt ctattatggg 
     121 gtacctgtgt ggaaagaagc aaccactact ctattttgtg catcagatgc taaagcatat 
     181 gatacagagg tacataatgt ctgggccaca catgcttgtg tacccacaga ccccaaccca 
     241 caagaagtag acttggtaaa tgtgacagaa aattttaata tgtggaaaaa taacatggta 
     301 gaacaaatgc atgaggatat aattagttta tgggatcaaa gcctaaaacc atgtgtaaaa 
     361 ttaaccccgc tctgtgttac cttagattgc aaagatgtga atattactaa aagcaatggt 
     421 actgtcaaca ttactaacgt gaatactact agctggccac aaatgcaagc aggagaaata 
     481 aaaaattgct ctttcaatat tagcacagac ataagagata aggtgcggaa agaatatgca 
     541 cttttttata accttgatgt agtaaaaata gaagggggga atagtactag ctataggttg 
     601 gtaagttgta acacctcagt ccttacacag gcctgtccaa aggtatcctt tgagccaatt 
     661 cccatacatt attgtgcccc ggctggtttt gcgattctaa agtgtaaaga taaggagttc 
     721 aatggaacag gaccatgtac aaatgtcagc acagtacaat gtacacatgg aattagacca 
     781 gtagtgtcaa ctcaactgct attaaatggc agtctagcag aagaaggggt agtaattaga 
     841 tccgaaaatt tcacaaacaa tgctaaaacc ataatagtac agctgaataa atctgtagta 
     901 attaattgca caagacctaa caacaataca agaaggagta tacctatagg accaggcagt 
     961 gcattttatg caacaggaga tataatagga gatataagac aagcacattg taacattagt 
    1021 ggaatagaat ggaacaacac attaaaacaa ataagtacaa aactaagaaa acaatttaac 
    1081 agaacaatag cctttaggca atcctcagga ggggacccag aagttgtaat gcacagtttt 
    1141 atttgtagag gggaattttt ctactgtaat acatctcaac tgttcaattg gaatgatact 
    1201 acagggtcaa ttcacactaa tggaactatc acactcccat gcagaataaa acaaattgta 
    1261 aacatgtggc agggagtagg aaaagcaatg tatgcccctc ccatcagagg actaattaac 
    1321 tgtacatcaa atattacagg gctgctatta acaagagatg gtggtgaaga gaacaggacc 
    1381 accgagacct ttagacctca aggaggaaat atgagagaca attggagaag tgaattatat 
    1441 aaatataaag tagtaaaaat tgaaccacta ggaatagcac ccaccaaggc aaagcgaaga 
    1501 gtggtgcaaa gggaaaaaag agcaataggg gtaataggag ctatgttcct tgggttcttg 
    1561 ggaatagcag gaagcactat gggcgcagcg tcactgacgc tgacggtaca ggccagacaa 
    1621 ttattgtctg gtatagtgca acagcagaac aatttgctga gagctattga ggcgcaacaa 
    1681 catctgttgc aactcacagt ctggggtatc aagcagctcc aggcaagagt cctggctgtg 
    1741 gaaagatacc taagggatca acagctcctg ggaatttggg gttgctctgg aaagctcatt 
    1801 tgcaccactg ctgtgccttg gaatactagt tggagtaata aatcttatga tcagatttgg 
    1861 gggaatatga catggatgca atgggaaaga gaaattgata attacacagg cttaatatac 
    1921 agcttaattg aagaatcgca aatccaacaa gaaaagaatg aacaagactt attgtcatta 
    1981 gatcaatggg caagtttgtg gaattggttt gacatatcaa actggctatc gtatatagaa 
    2041 atattcataa tgatagtagg gggcttaata ggtttaagaa tagtttttgc tgtactttct 
    2101 ataataaata gagttaggca gggatactca cccttatcgt tccagaccca cctcccagcc 
    2161 aggaggggac ccgacaggcc cgaaggaacc gaagaagacg gtggagagag agacagagac 
    2221 acatccagac cattagtggg tggattctta gcaatcatct gggtcgacct gcggagcctg 
    2281 tgcctcttca gctaccaccg cttgagagac ttactcttga ttgtaacgag gactgtggaa 
    2341 ctgctgggac gcagggggtg ggaactcctc aaatattgct ggaacatcct acagtattgg 
    2401 agtcaggaac taaagaatag tgctattagc ttgcttaata ccacagcaat agcagtggct 
    2461 gaggggacag acagaattat agaagctttg caaagaattg gaagagctat cctcaatata 
    2521 cctaggagaa taagacaggg cttggaaagg gctttgctat aa
//
last modified: Tue May 31 10:56 2022


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