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LOCUS	    HQ377393		    2574 bp    RNA     linear	VRL 21-JAN-2011
DEFINITION  HIV-1 isolate subject_247_week48_clone 19 from Colombia envelope
	    glycoprotein (env) gene, complete cds
ACCESSION   HQ377393
VERSION     HQ377393.1 GI:317407901
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 2574)
            Show all sequences for reference 1
  AUTHORS   McNicholas,P.M., Mann,P.A., Bsc,L.W., Phd,P.Q., Lee,E.,
	    McCarthy,M., Shen,J., Black,T.A. and Strizki,J.M.
  TITLE     Mapping and Characterization of Vicriviroc Resistance Mutations
	    From HIV-1 Isolated from Treatment-Experienced Subjects Enrolled in
	    a Phase II Study (VICTOR-E1).
  JOURNAL   J. Acquir. Immune Defic. Syndr.. 56(3); 222-9 (2011)
  PUBMED    21209592
REFERENCE   2 (bases 1 to 2574)
            Show all sequences for reference 2
  AUTHORS   McNicholas,P.M. and Strizki,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-OCT-2010) Department of Infectious Diseases, Merck,
	    2015 Galloping Hill Road, Kenilworth, NJ 07033, USA
FEATURES             Location/Qualifiers
     source	     1..2574
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="subject_247_week48_clone 19"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="Colombia"
		     /collection_date="Sep-2007"
     gene	     1..2574
		     /gene="env"
     CDS	     1..2574
		     /gene="env"
		     /note="gp160"
		     /codon_start="1"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="ADV17484.1"
		     /db_xref="GI:317407902"
		     /translation="MRVMGIRKNYQHWWRGGMMLLGMLMICSVVGQQLWVTVYYGVPV
		     WKEATTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEILLPNVTEDFDMGKNNMVD
		     QMHEDIISLWDQSLKPCVKLTPLCVTLNCNNNTRLNITQDTKNSSKIMGDGDMKNCSF
		     NVTTGIRNKMKKEYALFYNLDITQIDNETYRLTSCNTSVITQACPKVSFEPIPIHYCT
		     PAGYALLKCKDKKFNGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEGVVIRSQNF
		     SDNAKTIIVQLKEAIKINCTRPNNNTRKSIRIGHIGPGRPLYTTGGIIGDVRQAHCNL
		     SRAEWNSTLSQVAIKLGKQFGKNKTVFNSSSGGDLEIVMHTFNCGGEFFYCNTTKLFN
		     STWYSDGTISANDNDTSENITLPCRIKQIVNMWQEVGKAMYASPISGQIRCVSNITGL
		     LLTRDGGNGTGTSNNTETFRPGGGNMKDNWRSELYKYKVVKIEPLGVAPTRARRRVVQ
		     REKRAVGLGALFLGFLGAAGSAMGAASMTLTVQARQLLSGIVQQQNNLLMAIEAQQNM
		     LRLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICTTAVPWNATWSNKTQEEIW
		     NNMTWMQWEKEIDNYTAHIYTLLENSQNQQEKNEQELLALDKWENLWSWFSITNWLWY
		     IKIFIMIVGGLIGLRIVFAVLSIVNRVRQGYSPLSFQTHLPIPRGPDRPEGTEEEGGD
		     RDRDRSVRLVTGSFALIWDDLRSLCLFSYHRLRDLLLIVARIVELLGRRGWGILKYLW
		     NLLQYWSQELKNSAVSLLNVTAIAVAEGTDRIIEIAQRIGRAIIHIPRRIRQGFERAL
		     L"
BASE COUNT	901 a	 448 c	  610 g    615 t
ORIGIN
       1 atgagagtga tggggatcag gaagaattat cagcactggt ggagaggggg catgatgctc 
      61 cttgggatgt taatgatttg tagtgttgta ggacaacaat tgtgggtcac agtctattat 
     121 ggggtacctg tgtggaaaga agctaccacc acattatttt gtgcatcaga tgctaaagca 
     181 tatgatacag aggtacataa tgtttgggcc acacatgcct gtgtacccac agaccccaat 
     241 ccacaagaaa tactattgcc aaatgtaaca gaagattttg acatgggaaa aaataacatg 
     301 gtagatcaga tgcatgagga tataatcagt ttatgggatc aaagcctaaa accatgtgta 
     361 aaactgaccc cactctgtgt cactttaaat tgcaataata atactagatt aaatattact 
     421 caggacacca agaatagtag taaaataatg ggggacgggg acatgaaaaa ctgctccttc 
     481 aatgttacca caggcataag aaataagatg aaaaaagaat atgcactttt ttataacctt 
     541 gatataacac aaatagataa tgaaacctat aggttgacaa gttgtaacac ctcagtcatt 
     601 acacaggcct gtccaaaggt atcctttgag ccaattccca tacattattg tactccagct 
     661 ggttatgcac ttctaaagtg taaggataaa aagttcaatg gaacaggacc atgtacaaat 
     721 gtcagcacag tacaatgtac acatggcatt agaccagtag tatcaactca actactgtta 
     781 aatggcagtc tagcagaaga aggggtagta attagatctc aaaatttctc agacaatgct 
     841 aaaaccataa tagtacagct gaaggaagct ataaagatta attgtacaag acccaacaac 
     901 aatacaagaa aaagtatacg tataggacat ataggaccag ggagaccatt gtacacaaca 
     961 ggaggaataa taggggatgt aagacaagca cattgtaacc ttagtagagc agaatggaat 
    1021 agcactttaa gccaggtagc tatcaaatta ggcaaacaat ttggcaaaaa caaaacagtc 
    1081 tttaattcat cctcaggagg ggacctagaa attgtaatgc acacttttaa ttgtggaggg 
    1141 gaattcttct actgtaatac aacaaaattg tttaatagta cttggtatag tgatggaacg 
    1201 ataagtgcaa atgacaatga tacaagtgaa aacatcacac tcccatgcag aataaaacaa 
    1261 attgtaaaca tgtggcagga agtgggaaaa gcaatgtatg cctctcctat cagcggacaa 
    1321 attagatgtg tatcaaatat aacagggctg ctattaacaa gggatggtgg gaacgggact 
    1381 ggaacgagca ataacaccga gaccttcaga cctggaggag gaaatatgaa ggataattgg 
    1441 agaagtgaat tatacaaata taaagtagta aaaattgaac cattaggagt ggcacccacc 
    1501 agggcaaggc gaagagtggt gcagagagaa aaaagagcag tgggactggg agctttgttc 
    1561 cttgggttct tgggagcagc aggaagcgct atgggcgcag cgtcaatgac gctgacggta 
    1621 caagccagac aattattgtc tggtatagtg cagcagcaga acaacttgct gatggctatt 
    1681 gaggcacaac agaatatgtt gcgactcaca gtctggggca tcaagcagct ccaggcaaga 
    1741 gtcctagctg tggaaagata cctaagggat caacagctcc tagggatttg gggttgctct 
    1801 ggaaaactca tctgcaccac tgctgtgcct tggaatgcta cttggagtaa taaaactcag 
    1861 gaggaaattt ggaataacat gacctggatg cagtgggaaa aagaaattga taattacaca 
    1921 gcacacatat acacattact tgaaaattca caaaaccaac aagaaaagaa tgaacaagaa 
    1981 ttattggcat tagataagtg ggaaaatctg tggagttggt ttagcataac aaattggctg 
    2041 tggtatataa aaatattcat aatgatagta ggaggcttga taggcttgag aatagttttt 
    2101 gctgtacttt ctatagttaa tagagttagg cagggatact caccattatc gtttcagacc 
    2161 cacctcccaa tcccgagggg acccgacagg ccagaaggaa cagaagaaga aggtggagac 
    2221 agagacagag acagatcagt tcgattagtg actggatcct tcgcacttat ctgggacgac 
    2281 ctgcggagcc tgtgcctctt cagctaccat cgcttgagag acttactctt gattgtagcg 
    2341 aggatcgtgg aacttctggg acgcaggggg tggggaatcc tcaaatattt gtggaatctc 
    2401 ctacagtatt ggagtcagga gctaaagaat agtgctgtta gcttgcttaa tgtcacagct 
    2461 atcgcagtag ctgaagggac agataggatt atagaaatag cacaaagaat tgggagagct 
    2521 atcatccaca tacctagaag aataagacag ggcttcgaaa gggctttgct ataa
//
last modified: Tue May 31 10:56 2022


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