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LOCUS HQ377393 2574 bp RNA linear VRL 21-JAN-2011
DEFINITION HIV-1 isolate subject_247_week48_clone 19 from Colombia envelope
glycoprotein (env) gene, complete cds
ACCESSION HQ377393
VERSION HQ377393.1 GI:317407901
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 2574)
Show all sequences for reference 1
AUTHORS McNicholas,P.M., Mann,P.A., Bsc,L.W., Phd,P.Q., Lee,E.,
McCarthy,M., Shen,J., Black,T.A. and Strizki,J.M.
TITLE Mapping and Characterization of Vicriviroc Resistance Mutations
From HIV-1 Isolated from Treatment-Experienced Subjects Enrolled in
a Phase II Study (VICTOR-E1).
JOURNAL J. Acquir. Immune Defic. Syndr.. 56(3); 222-9 (2011)
PUBMED 21209592
REFERENCE 2 (bases 1 to 2574)
Show all sequences for reference 2
AUTHORS McNicholas,P.M. and Strizki,J.
TITLE Direct Submission
JOURNAL Submitted (06-OCT-2010) Department of Infectious Diseases, Merck,
2015 Galloping Hill Road, Kenilworth, NJ 07033, USA
FEATURES Location/Qualifiers
source 1..2574
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="subject_247_week48_clone 19"
/host="Homo sapiens"
/db_xref="taxon:11676"
/country="Colombia"
/collection_date="Sep-2007"
gene 1..2574
/gene="env"
CDS 1..2574
/gene="env"
/note="gp160"
/codon_start="1"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="ADV17484.1"
/db_xref="GI:317407902"
/translation="MRVMGIRKNYQHWWRGGMMLLGMLMICSVVGQQLWVTVYYGVPV
WKEATTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEILLPNVTEDFDMGKNNMVD
QMHEDIISLWDQSLKPCVKLTPLCVTLNCNNNTRLNITQDTKNSSKIMGDGDMKNCSF
NVTTGIRNKMKKEYALFYNLDITQIDNETYRLTSCNTSVITQACPKVSFEPIPIHYCT
PAGYALLKCKDKKFNGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEGVVIRSQNF
SDNAKTIIVQLKEAIKINCTRPNNNTRKSIRIGHIGPGRPLYTTGGIIGDVRQAHCNL
SRAEWNSTLSQVAIKLGKQFGKNKTVFNSSSGGDLEIVMHTFNCGGEFFYCNTTKLFN
STWYSDGTISANDNDTSENITLPCRIKQIVNMWQEVGKAMYASPISGQIRCVSNITGL
LLTRDGGNGTGTSNNTETFRPGGGNMKDNWRSELYKYKVVKIEPLGVAPTRARRRVVQ
REKRAVGLGALFLGFLGAAGSAMGAASMTLTVQARQLLSGIVQQQNNLLMAIEAQQNM
LRLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICTTAVPWNATWSNKTQEEIW
NNMTWMQWEKEIDNYTAHIYTLLENSQNQQEKNEQELLALDKWENLWSWFSITNWLWY
IKIFIMIVGGLIGLRIVFAVLSIVNRVRQGYSPLSFQTHLPIPRGPDRPEGTEEEGGD
RDRDRSVRLVTGSFALIWDDLRSLCLFSYHRLRDLLLIVARIVELLGRRGWGILKYLW
NLLQYWSQELKNSAVSLLNVTAIAVAEGTDRIIEIAQRIGRAIIHIPRRIRQGFERAL
L"
BASE COUNT 901 a 448 c 610 g 615 t
ORIGIN
1 atgagagtga tggggatcag gaagaattat cagcactggt ggagaggggg catgatgctc
61 cttgggatgt taatgatttg tagtgttgta ggacaacaat tgtgggtcac agtctattat
121 ggggtacctg tgtggaaaga agctaccacc acattatttt gtgcatcaga tgctaaagca
181 tatgatacag aggtacataa tgtttgggcc acacatgcct gtgtacccac agaccccaat
241 ccacaagaaa tactattgcc aaatgtaaca gaagattttg acatgggaaa aaataacatg
301 gtagatcaga tgcatgagga tataatcagt ttatgggatc aaagcctaaa accatgtgta
361 aaactgaccc cactctgtgt cactttaaat tgcaataata atactagatt aaatattact
421 caggacacca agaatagtag taaaataatg ggggacgggg acatgaaaaa ctgctccttc
481 aatgttacca caggcataag aaataagatg aaaaaagaat atgcactttt ttataacctt
541 gatataacac aaatagataa tgaaacctat aggttgacaa gttgtaacac ctcagtcatt
601 acacaggcct gtccaaaggt atcctttgag ccaattccca tacattattg tactccagct
661 ggttatgcac ttctaaagtg taaggataaa aagttcaatg gaacaggacc atgtacaaat
721 gtcagcacag tacaatgtac acatggcatt agaccagtag tatcaactca actactgtta
781 aatggcagtc tagcagaaga aggggtagta attagatctc aaaatttctc agacaatgct
841 aaaaccataa tagtacagct gaaggaagct ataaagatta attgtacaag acccaacaac
901 aatacaagaa aaagtatacg tataggacat ataggaccag ggagaccatt gtacacaaca
961 ggaggaataa taggggatgt aagacaagca cattgtaacc ttagtagagc agaatggaat
1021 agcactttaa gccaggtagc tatcaaatta ggcaaacaat ttggcaaaaa caaaacagtc
1081 tttaattcat cctcaggagg ggacctagaa attgtaatgc acacttttaa ttgtggaggg
1141 gaattcttct actgtaatac aacaaaattg tttaatagta cttggtatag tgatggaacg
1201 ataagtgcaa atgacaatga tacaagtgaa aacatcacac tcccatgcag aataaaacaa
1261 attgtaaaca tgtggcagga agtgggaaaa gcaatgtatg cctctcctat cagcggacaa
1321 attagatgtg tatcaaatat aacagggctg ctattaacaa gggatggtgg gaacgggact
1381 ggaacgagca ataacaccga gaccttcaga cctggaggag gaaatatgaa ggataattgg
1441 agaagtgaat tatacaaata taaagtagta aaaattgaac cattaggagt ggcacccacc
1501 agggcaaggc gaagagtggt gcagagagaa aaaagagcag tgggactggg agctttgttc
1561 cttgggttct tgggagcagc aggaagcgct atgggcgcag cgtcaatgac gctgacggta
1621 caagccagac aattattgtc tggtatagtg cagcagcaga acaacttgct gatggctatt
1681 gaggcacaac agaatatgtt gcgactcaca gtctggggca tcaagcagct ccaggcaaga
1741 gtcctagctg tggaaagata cctaagggat caacagctcc tagggatttg gggttgctct
1801 ggaaaactca tctgcaccac tgctgtgcct tggaatgcta cttggagtaa taaaactcag
1861 gaggaaattt ggaataacat gacctggatg cagtgggaaa aagaaattga taattacaca
1921 gcacacatat acacattact tgaaaattca caaaaccaac aagaaaagaa tgaacaagaa
1981 ttattggcat tagataagtg ggaaaatctg tggagttggt ttagcataac aaattggctg
2041 tggtatataa aaatattcat aatgatagta ggaggcttga taggcttgag aatagttttt
2101 gctgtacttt ctatagttaa tagagttagg cagggatact caccattatc gtttcagacc
2161 cacctcccaa tcccgagggg acccgacagg ccagaaggaa cagaagaaga aggtggagac
2221 agagacagag acagatcagt tcgattagtg actggatcct tcgcacttat ctgggacgac
2281 ctgcggagcc tgtgcctctt cagctaccat cgcttgagag acttactctt gattgtagcg
2341 aggatcgtgg aacttctggg acgcaggggg tggggaatcc tcaaatattt gtggaatctc
2401 ctacagtatt ggagtcagga gctaaagaat agtgctgtta gcttgcttaa tgtcacagct
2461 atcgcagtag ctgaagggac agataggatt atagaaatag cacaaagaat tgggagagct
2521 atcatccaca tacctagaag aataagacag ggcttcgaaa gggctttgct ataa
//
last modified: Tue May 31 10:56 2022