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LOCUS	    HQ377384		    2604 bp    RNA     linear	VRL 21-JAN-2011
DEFINITION  HIV-1 isolate subject_247_day1_clone 39 from Colombia envelope
	    glycoprotein (env) gene, complete cds
ACCESSION   HQ377384
VERSION     HQ377384.1 GI:317407883
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 2604)
            Show all sequences for reference 1
  AUTHORS   McNicholas,P.M., Mann,P.A., Bsc,L.W., Phd,P.Q., Lee,E.,
	    McCarthy,M., Shen,J., Black,T.A. and Strizki,J.M.
  TITLE     Mapping and Characterization of Vicriviroc Resistance Mutations
	    From HIV-1 Isolated from Treatment-Experienced Subjects Enrolled in
	    a Phase II Study (VICTOR-E1).
  JOURNAL   J. Acquir. Immune Defic. Syndr.. 56(3); 222-9 (2011)
  PUBMED    21209592
REFERENCE   2 (bases 1 to 2604)
            Show all sequences for reference 2
  AUTHORS   McNicholas,P.M. and Strizki,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-OCT-2010) Department of Infectious Diseases, Merck,
	    2015 Galloping Hill Road, Kenilworth, NJ 07033, USA
FEATURES             Location/Qualifiers
     source	     1..2604
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="subject_247_day1_clone 39"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="Colombia"
		     /collection_date="Oct-2006"
     gene	     1..2604
		     /gene="env"
     CDS	     1..2604
		     /gene="env"
		     /note="gp160"
		     /codon_start="1"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="ADV17475.1"
		     /db_xref="GI:317407884"
		     /translation="MRVMGIRKNYQHWWRGGMMLLGMLMICSVVGQQLWVTVYYGVPV
		     WKEATTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEILLPNVTEDFDMGKNNMVD
		     QMHEDIISLWDQSLKPCVKLTPLCVTLNCTNITKSENITQANITTSGNITQVTQDTNS
		     SREIMGDGDMKNCSFDVTTGIRDKVKKEYALFYNLDITQIDNDTYRLTSCNTSVITQA
		     CPKVSFEPIPIHYCTPAGYALLKCKDKKFNGTGPCTNVSTVQCTHGIRPVVSTQLLLN
		     GSLAEEGVVIRSQNFSDNAKTIIVQLKEAIKINCTRPNNNTRKGIHLGPGGAFYTTGE
		     IIGDIRKAHCNLSRAEWNSTLSQVAIKLGEQFGKNKTVVFNSSSGGDLEIVMHIVNCG
		     GEFFYCNTTKLFNSTWYSNGTRLANDSDTRENITLPCRIKQIVNMWQEVGKAMYAPPI
		     SGQIRCVSNITGLLLTRDGGKENNKTETFRPEGGNMKDNWRSELYKYKVVKVEPLGVA
		     PTKAKRRVVQREKRTVGLGALFLGFLGAAGSTMGAASVTLTVQARQLLSGIVQQQNNL
		     LMAIEAQQNMLRLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICTTAAPWNAT
		     WSNKTQEEIWNNMTWMQWEKEIDNYTAQIYTLLENSQIQQEKNEQELLALDKWENLWS
		     WFSITNWLWYIKIFIMIVGGLIGLRIVFAVLSIVNRVRQGYSPLSFQTHLPIPRGPDR
		     PEGTEEEGGDRDRDRSVRLVAGSFALIWDDLRSLCLFSYHRLRDLLLIVARIVELLGR
		     RGWGILKYWWSLLQYWSQELKNSVVSLLNATAIAVAEGTDRIIEIAQRIGRAIIHIPR
		     RIRQGFERALL"
BASE COUNT	905 a	 457 c	  618 g    624 t
ORIGIN
       1 atgagagtga tggggatcag gaagaattat cagcactggt ggagaggggg catgatgctc 
      61 cttgggatgt taatgatttg tagtgttgta ggacaacaat tgtgggtcac agtctattat 
     121 ggggtacctg tgtggaaaga agctaccacc acactatttt gtgcatcaga tgctaaagca 
     181 tatgatacag aggtacataa tgtttgggcc acacatgcct gtgtacccac agaccccaat 
     241 ccacaagaaa tactattgcc aaatgtaaca gaagattttg acatgggaaa aaataacatg 
     301 gtagatcaga tgcatgagga tataatcagt ttatgggatc aaagcctaaa accctgtgta 
     361 aaactgaccc cactctgtgt cactttaaat tgcactaata ttactaaatc agaaaatatt 
     421 actcaggcca atattactac gtcagggaat attactcagg tcactcagga caccaatagt 
     481 agtagggaaa taatggggga cggggacatg aaaaactgct ctttcgatgt taccacaggc 
     541 ataagagata aggtgaaaaa agaatatgca cttttttata accttgatat aacacaaata 
     601 gataatgaca cctataggtt gacaagttgt aacacctcag tcattacaca ggcctgtcca 
     661 aaggtatcct ttgagccaat tcccatacat tattgtactc cagctggtta tgcacttcta 
     721 aagtgtaagg ataaaaagtt caatggaaca ggaccatgta caaatgtcag cacagtacaa 
     781 tgtacacatg gcattaggcc agtagtatcg actcaactac tgttaaatgg cagtctagca 
     841 gaagaagggg tagtaattag atctcaaaat ttctcagaca atgctaaaac cataatagta 
     901 cagctgaagg aagctataaa gattaattgt acaagaccca acaacaatac aagaaaaggt 
     961 atacatctag gaccaggggg agcattttac acaacaggtg aaataatagg agatataaga 
    1021 aaagcacatt gtaaccttag tagagcagaa tggaatagca ctttaagcca ggtagctatc 
    1081 aaattaggcg aacaatttgg caaaaacaaa acagtagtct ttaattcatc ctcaggaggg 
    1141 gacctagaaa ttgtaatgca cattgttaat tgtggagggg agttcttcta ctgtaataca 
    1201 acaaaattgt ttaatagtac ttggtatagt aatggaacgc gacttgcaaa tgacagtgat 
    1261 acaagggaaa acatcacact cccatgcaga ataaaacaaa ttgtaaacat gtggcaggaa 
    1321 gtaggaaaag caatgtatgc ccctcctatc agcggacaaa ttagatgtgt atcaaatata 
    1381 acagggctgc ttttaacaag ggatggtggg aaagagaaca ataaaaccga gaccttcaga 
    1441 cctgaaggag gaaacatgaa ggataattgg agaagtgaat tatacaaata taaagtagta 
    1501 aaagttgagc cattaggagt agcacccacc aaggcaaaga gaagagtggt gcagagagaa 
    1561 aaaagaacag tgggactggg agctttgttc cttgggttct tgggagcagc aggaagcact 
    1621 atgggcgcag cgtcagtgac gctgacggta caagccagac aattattgtc tggtatagtg 
    1681 caacagcaga acaacttgct gatggctatt gaggcgcaac aaaatatgtt gcgactcaca 
    1741 gtctggggca tcaagcagct ccaggcaaga gtcctagctg tggaaagata cctaagggat 
    1801 caacagctcc tagggatttg gggttgctct ggaaaactca tctgcaccac tgctgcgcct 
    1861 tggaatgcta cttggagtaa taaaactcag gaggagattt ggaataacat gacctggatg 
    1921 cagtgggaaa aagaaattga taattacaca gcacaaatat acacattact tgaaaattca 
    1981 caaatccaac aagaaaagaa tgaacaagaa ttattggcat tagataagtg ggaaaatctg 
    2041 tggagttggt ttagcataac aaattggctg tggtatataa aaatattcat aatgatagta 
    2101 ggaggcttga taggcttaag aatagttttt gctgtacttt ctatagtaaa tagagttagg 
    2161 cagggatact caccattatc gtttcagacc cacctcccaa tcccgagggg acccgacagg 
    2221 ccagaaggaa cagaagaaga aggtggagac agagacagag acagatcagt tcgattagtg 
    2281 gctggatcct tcgcacttat ctgggacgac ctgcggagcc tgtgcctctt cagctaccac 
    2341 cgcttgagag acttactctt gattgtagcg aggattgtgg aacttctggg acgcaggggg 
    2401 tggggaatcc tcaaatattg gtggagtctc ctacagtatt ggagtcagga gctaaagaat 
    2461 agtgttgtta gcttgcttaa tgctacagct atcgcagtag ctgaagggac agataggatt 
    2521 atagaaatag cacaaagaat tggtagagct atcatccaca tacctagaag aataagacag 
    2581 ggcttcgaaa gggctttgct ataa
//
last modified: Tue May 31 10:56 2022


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