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LOCUS	    HQ257201		     708 bp    RNA     linear	VRL 09-MAY-2011
DEFINITION  HIV-1 isolate ESQ54 from USA reverse transcriptase (pol) gene,
	    partial cds
ACCESSION   HQ257201
VERSION     HQ257201.1 GI:332100123
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 708)
            Show all sequences for reference 1
  AUTHORS   Baeten,J.M., Lingappa,J., Beck,I., Frenkel,L.M., Pepper,G.,
	    Celum,C., Wald,A., Fife,K.H., Were,E., Mugo,N., Sanchez,J.,
	    Essex,M., Makhema,J., Kiarie,J., Farquhar,C. and Corey,L.
  TITLE     Herpes simplex virus type 2 suppressive therapy with acyclovir or
	    valacyclovir does not select for specific HIV-1 resistance in
	    HIV-1/HSV-2 dually infected persons
  JOURNAL   J. Infect. Dis. 203 (1), 117-121 (2011)
  PUBMED    21148504
REFERENCE   2 (bases 1 to 708)
            Show all sequences for reference 2
  AUTHORS   Pepper,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-SEP-2010) Virology, University of Washington, Seattle
	    Childrens Hospital 4800 Sandpoint Way NE W8814, Seattle, WA 98105,
	    USA
FEATURES             Location/Qualifiers
     source	     1..708
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="ESQ54"
		     /isolation_source="plasma"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="USA"
		     /note="subtype: B"
     gene	     <1..>708
		     /gene="pol"
     CDS	     <1..>708
		     /gene="pol"
		     /codon_start="1"
		     /transl_table="1"
		     /product="reverse transcriptase"
		     /protein_id="AEE01103.1"
		     /db_xref="GI:332100124"
		     /translation="PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKE
		     GKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKK
		     NKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIF
		     QSSMIKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRHHLLRWGLTTPD
		     KKHQKEPPFLWMGYELHP"
BASE COUNT	285 a	 119 c	  139 g    165 t
ORIGIN
       1 cccattagtc ctattgaaac tgtaccagta aaattaaagc caggaatgga tggcccaaaa 
      61 gttaaacaat ggccattgac agaagaaaaa ataaaagcat tagtagaaat ttgtacagaa 
     121 atggaaaagg aaggaaaaat ttcaaaaatt gggcctgaaa atccatacaa tactccagta 
     181 tttgccataa agaaaaaaga cagtactaaa tggagaaaat tagtagactt cagggaactt 
     241 aataaaagaa ctcaagactt ctgggaagtt caattaggaa taccacatcc cgcagggtta 
     301 aaaaagaaca aatcagtaac agtactggat gtgggtgatg catatttttc agttccatta 
     361 gatgaagact tcaggaagta tactgcattt accataccta gcataaacaa tgagacacca 
     421 gggattagat atcagtacaa tgtgctacca cagggatgga aaggatcacc agcaatattc 
     481 caaagtagca tgataaaaat cttagagcct tttagaaaac aaaatccaga catagttatc 
     541 tatcaataca tggatgattt gtatgtagga tctgacttag aaatagggca gcatagaaca 
     601 aaaatagagg aactgagaca ccatctgttg aggtggggat taaccacacc agacaaaaaa 
     661 catcagaagg aacctccatt tctttggatg ggttatgaac tccatcct
//
last modified: Tue May 31 10:56 2022


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