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LOCUS	    HQ172262		     630 bp    DNA     linear	VRL 01-SEP-2010
DEFINITION  HIV-1 isolate E_B_DNA_k from Zimbabwe envelope glycoprotein (env)
	    gene, partial cds
ACCESSION   HQ172262
VERSION     HQ172262.1 GI:304572623
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 630)
            Show all sequences for reference 1
  AUTHORS   Gantt,S., Carlsson,J., Heath,L., Bull,M.E., Shetty,A.K.,
	    Mutsvangwa,J., Musingwini,G., Woelk,G., Zijenah,L.S.,
	    Katzenstein,D.A., Mullins,J.I. and Frenkel,L.M.
  TITLE     Genetic analyses of HIV-1 env sequences demonstrate limited
	    compartmentalization in breast milk and suggest viral replication
	    within the breast that increases with mastitis.
  JOURNAL   J. Virol.. 84(20); 10812-9 (2010)
  PUBMED    20660189
REFERENCE   2 (bases 1 to 630)
            Show all sequences for reference 2
  AUTHORS   Gantt,S., Carlsson,J.N., Heath,L., Bull,M.E., Zijenah,A.K.,
	    Mutsvangwa,J., Musingwini,G., Woelk,G., Zijenah,L.S.,
	    Katzenstein,D.A., Mullins,J.I. and Frenkel,L.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-AUG-2010) Center for Childhood Infections and
	    Prematurity, Seattle Children''s Research Institute, 1900 9th Ave,
	    Seattle, WA 98101, USA
FEATURES             Location/Qualifiers
     source	     1..630
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="E_B_DNA_k"
		     /isolation_source="whole blood"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="Zimbabwe"
		     /collection_date="2005"
		     /note="subtype: C"
     gene	     <1..>630
		     /gene="env"
     CDS	     <1..>630
		     /gene="env"
		     /note="gp120"
		     /codon_start="1"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="ADM45451.1"
		     /db_xref="GI:304572624"
		     /translation="SLAEEGIIIRSKNLTNNAKTIIVHLNKSVEINCTRPGNNTRTSV
		     RIGPGQTFYATGDIIGDIRQAHCNISQQKWYEALQGVVEKLREHFPNKIINFTSPSGG
		     DLEITTHSFNCGGEFFYCNTSKLFNSTYWHNDTCMPNDTCKGTGNSTKITIPCRIKQI
		     INMWQEVGRAMYAPPIAGNITCRSNITGLLLIRDGGQTNKNSTTEIFRPG"
BASE COUNT	262 a	 105 c	  121 g    142 t
ORIGIN
       1 agcctagcag aagaggggat aataattaga tctaagaatt tgacaaacaa tgccaaaaca 
      61 ataatagtac atcttaataa atctgtagaa attaattgta caagacccgg caataataca 
     121 agaacaagtg taaggatagg accaggacag acattctatg caacaggaga cataatagga 
     181 gatataagac aagcacattg taacattagt caacaaaaat ggtatgaagc tttacaaggg 
     241 gtagtagaga aattaagaga acacttccct aataaaataa taaactttac atcaccctca 
     301 ggaggggacc tagagattac aacacatagc tttaattgcg gaggagagtt tttctattgc 
     361 aatacatcaa aactgtttaa tagtacatac tggcataatg atacctgcat gcctaatgat 
     421 acgtgcaagg gaacaggaaa ttcaacaaaa atcacaatcc catgtagaat aaaacaaatt 
     481 ataaacatgt ggcaggaggt aggacgagca atgtatgccc ctcccattgc aggaaacata 
     541 acatgtagat caaatatcac aggactgcta ttaatacgtg atggaggaca gacaaataaa 
     601 aatagtacca cagagatatt tagacctgga 
//
last modified: Tue May 31 10:56 2022


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