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LOCUS	    HQ172213		     604 bp    RNA     linear	VRL 01-SEP-2010
DEFINITION  HIV-1 isolate B_left_BM_RNA_h from Zimbabwe envelope glycoprotein
	    (env) gene, partial cds
ACCESSION   HQ172213
VERSION     HQ172213.1 GI:304572527
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 604)
            Show all sequences for reference 1
  AUTHORS   Gantt,S., Carlsson,J., Heath,L., Bull,M.E., Shetty,A.K.,
	    Mutsvangwa,J., Musingwini,G., Woelk,G., Zijenah,L.S.,
	    Katzenstein,D.A., Mullins,J.I. and Frenkel,L.M.
  TITLE     Genetic analyses of HIV-1 env sequences demonstrate limited
	    compartmentalization in breast milk and suggest viral replication
	    within the breast that increases with mastitis.
  JOURNAL   J. Virol.. 84(20); 10812-9 (2010)
  PUBMED    20660189
REFERENCE   2 (bases 1 to 604)
            Show all sequences for reference 2
  AUTHORS   Gantt,S., Carlsson,J.N., Heath,L., Bull,M.E., Zijenah,A.K.,
	    Mutsvangwa,J., Musingwini,G., Woelk,G., Zijenah,L.S.,
	    Katzenstein,D.A., Mullins,J.I. and Frenkel,L.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-AUG-2010) Center for Childhood Infections and
	    Prematurity, Seattle Children''s Research Institute, 1900 9th Ave,
	    Seattle, WA 98101, USA
FEATURES             Location/Qualifiers
     source	     1..604
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="B_left_BM_RNA_h"
		     /isolation_source="skim breast milk lactoserum"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="Zimbabwe"
		     /collection_date="2005"
		     /note="subtype: C"
     gene	     <1..>604
		     /gene="env"
     CDS	     <1..>604
		     /gene="env"
		     /note="gp120"
		     /codon_start="2"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="ADM45404.1"
		     /db_xref="GI:304572528"
		     /translation="SIAEDIIIRSENLTNNAKTIIVQFNETVKITCTRHNNNTRESMR
		     IGPGHTFYATGDIIGDIREAHCNVSKRNWTKALQGVSEKLKEHFNKTIKFNSSSGGDP
		     EITLHSFNCGGEFFYCNTSQLFNFTYNTTTDNTTSEDITLTLPCRIKQIINMWQEVGQ
		     AMYAPPIAGNITCVSNITGLLLVRDGGNTNTSHSTEIFRPG"
BASE COUNT	251 a	 106 c	  108 g    139 t
ORIGIN
       1 tagcatagca gaagacataa taattagatc tgaaaatctg acaaacaatg ccaaaacaat 
      61 aatagtacag tttaatgaaa ctgtaaaaat tacgtgtaca agacacaaca ataatacaag 
     121 agaaagcatg aggataggac caggacacac attctatgca acaggtgata taataggaga 
     181 catcagagaa gcacattgta atgttagtaa aaggaattgg actaaagctt tacaaggggt 
     241 aagtgaaaaa ttaaaagaac actttaataa aacaataaaa tttaactcat cctcaggagg 
     301 ggacccagaa attacgttgc atagctttaa ttgtggagga gaatttttct attgcaatac 
     361 atcgcaactg tttaatttta catacaatac aactacagat aatacaactt cagaggacat 
     421 cacacttaca ctcccatgca gaataaaaca aattataaac atgtggcagg aggtaggaca 
     481 ggcaatgtat gcccctccca ttgcaggaaa cataacatgt gtatcaaaca tcacaggact 
     541 actattagta cgtgatggag gcaacactaa cactagccat agcacagaaa tattcagacc 
     601 tgga
//
last modified: Tue May 31 10:56 2022


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