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LOCUS	    HQ110629		     215 bp    DNA     linear	VRL 03-NOV-2010
DEFINITION  HIV-1 clone NII-GTB-IND-TatN16 from India tat protein (tat) gene,
	    exon 1 and partial cds
ACCESSION   HQ110629
VERSION     HQ110629.1 GI:310769926
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 215)
            Show all sequences for reference 1
  AUTHORS   Ronsard,L., Lata,S., Singh,J., Ramachandran,V.G., Das,S. and
	    Banerjea,A.C.
  TITLE     Molecular and genetic characterization of natural HIV-1 Tat Exon-1
	    variants from North India and their functional implications.
  JOURNAL   PLoS. One.. 9(1); e85452 (2014)
  PUBMED    24465566
REFERENCE   2 (bases 1 to 215)
            Show all sequences for reference 2
  AUTHORS   Ronsard,L.M., Sood,V., Das,S., Ramachandran,V.G. and Banerjea,A.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2010) Virology II, National Institute of
	    Immunology, Aruna Asaf Ali Marg, New Delhi, Delhi 110067, India
REFERENCE   3
            Show all sequences for reference 3
  AUTHORS   Neogi,U., Sood,V., Ronsard,L., Singh,J., Lata,S.,
	    Ramachandran,V.G., Das,S., Wanchu,A. and Banerjea,A.C.
  TITLE     Genetic architecture of HIV-1 genes circulating in north India &
	    their functional implications.
  JOURNAL   Indian. J. Med. Res.. 134(6); 769-78 (2011)
  PUBMED    22310812
FEATURES             Location/Qualifiers
     source	     1..215
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /clone="NII-GTB-IND-TatN16"
		     /country="India"
		     /collection_date="2009"
		     /note="subtype: C"
     gene	     1..>215
		     /gene="tat"
     CDS	     1..>215
		     /gene="tat"
		     /note="trans-activator of transcription; regulatory
		     protein"
		     /codon_start="1"
		     /transl_table="1"
		     /product="tat protein"
		     /protein_id="ADP21496.1"
		     /db_xref="GI:310769927"
		     /translation="MEPVDPNLEPWNHPGSQPKTACNTCYCKYCSYHCPVCFQTKGLS
		     ISYGRKKRRQRRSAPQSSEDHQNLISK"
     exon	     1..215
		     /gene="tat"
		     /number="1"
BASE COUNT	 71 a	  50 c	   46 g     48 t
ORIGIN
       1 atggagccag tagatcctaa cctagagccc tggaaccatc caggaagtca gcctaaaact 
      61 gcttgcaata catgctattg taaatactgt agctaccatt gtccagtttg ctttcagaca 
     121 aaaggcttaa gcatttccta tggcaggaag aagcggagac agcgacgaag cgctcctcaa 
     181 agcagtgagg atcatcaaaa tcttatatca aagca
//
last modified: Tue May 31 10:56 2022


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