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LOCUS HM746034 805 bp DNA linear VRL 13-MAR-2011
DEFINITION HIV-1 isolate DL2315H7 from Guinea-Bissau envelope glycoprotein
(env) gene, partial cds
ACCESSION HM746034
VERSION HM746034.1 GI:325505300
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 805)
Show all sequences for reference 1
AUTHORS Esbjornsson,J., Mansson,F., Kvist,A., Isberg,P.-E.,
Nowroozalizadeh,S., Biague,A.J., da Silva,Z.J., Jansson,M.,
Fenyo,E.M., Norrgren,H. and Medstrand,P.
TITLE Inhibition of HIV-1 disease progression by contemporaneous HIV-2
infection.
JOURNAL N. Engl. J. Med.. 367(3); 224-32 (2012)
PUBMED 22808957
REFERENCE 2 (bases 1 to 805)
Show all sequences for reference 2
AUTHORS Esbjornsson,J., Mansson,F., Kvist,A., Isberg,P.-E., Biague,A.J., da
Silva,Z.J., Fenyo,E.M., Norrgren,H. and Medstrand,P.
TITLE Direct Submission
JOURNAL Submitted (09-JUL-2010) Experimental Medical Science, Molecular
Virology, BMC C13, Solvegatan 19, Lund 22184, Sweden
COMMENT Subtype assigned by LANL database based on RIP and phylogenetic
tree.
FEATURES Location/Qualifiers
source 1..805
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="DL2315H7"
/host="Homo sapiens"
/db_xref="taxon:11676"
/country="Guinea-Bissau"
/collection_date="03-Mar-2003"
gene <1..>805
/gene="env"
CDS <1..>805
/gene="env"
/note="V1-V3"
/codon_start="3"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="ADZ17504.1"
/db_xref="GI:325505301"
/translation="TEDFNMWKNNMVEQMQVDIISLWDQSLKPCVKLTPLCVTLECND
STFSDNSASREMREEIKNCSFNVTTELRDKKQQVYALFYKIDVVSINNNSKYRLTNCN
TSAMTQACPKVTFEPIPIHYCAPAGFAILKCNEEEFNGTGPCTNVSTVQCTHGIKPVV
STQLLLNGSLSETEIVIRSENITNNAKTIIVQLNETVKINCTRPANNTRKSVHIGPGQ
TFYATGDIIGDIRQAHCNVSKTEWENTLQKVATQLRKYFKNSTRIIFANS"
BASE COUNT 312 a 144 c 155 g 194 t
ORIGIN
1 taacagaaga ttttaacatg tggaaaaata acatggtaga acagatgcag gtagatataa
61 ttagtctatg ggaccaaagc ctaaagccat gtgtaaagtt aacccctctc tgcgtcactt
121 tagaatgtaa tgatagtaca ttcagcgata acagcgcctc tagggaaatg cgagaggaaa
181 taaaaaactg ctctttcaat gtgaccacag aactaagaga taagaagcag caagtgtatg
241 cactttttta taaaattgat gtagtatcaa ttaataataa tagtaagtat aggttaacaa
301 attgtaatac ctcagccatg acacaggctt gcccaaaggt aacctttgag ccaattccca
361 tacattattg tgccccagct ggttttgcaa ttctaaagtg taatgaagag gagttcaatg
421 gaacagggcc atgcacgaat gtcagcacag tacaatgcac acatggaatc aagccagtag
481 tatcaactca actgctgtta aatggcagtc tatcagaaac agagatagtg attagatctg
541 aaaatatcac aaacaatgcc aaaaccataa tagttcagtt aaatgagact gtaaaaatta
601 attgtaccag acctgccaac aatacaagga agagtgtaca tataggacca ggacaaacct
661 tctatgcaac aggtgacata ataggagata taagacaagc acattgtaat gtcagtaaaa
721 cagaatggga aaacacttta caaaaggtgg ctacacaatt aaggaagtac ttcaagaaca
781 gcaccagaat aatctttgct aactc
//
last modified: Tue May 31 10:56 2022