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LOCUS HM745950 825 bp DNA linear VRL 13-MAR-2011
DEFINITION HIV-1 isolate DL2075H4 from Guinea-Bissau envelope glycoprotein
(env) gene, partial cds
ACCESSION HM745950
VERSION HM745950.1 GI:325505132
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 825)
Show all sequences for reference 1
AUTHORS Esbjornsson,J., Mansson,F., Kvist,A., Isberg,P.-E.,
Nowroozalizadeh,S., Biague,A.J., da Silva,Z.J., Jansson,M.,
Fenyo,E.M., Norrgren,H. and Medstrand,P.
TITLE Inhibition of HIV-1 disease progression by contemporaneous HIV-2
infection.
JOURNAL N. Engl. J. Med.. 367(3); 224-32 (2012)
PUBMED 22808957
REFERENCE 2 (bases 1 to 825)
Show all sequences for reference 2
AUTHORS Esbjornsson,J., Mansson,F., Kvist,A., Isberg,P.-E., Biague,A.J., da
Silva,Z.J., Fenyo,E.M., Norrgren,H. and Medstrand,P.
TITLE Direct Submission
JOURNAL Submitted (09-JUL-2010) Experimental Medical Science, Molecular
Virology, BMC C13, Solvegatan 19, Lund 22184, Sweden
COMMENT Subtype assigned by LANL database based on RIP and phylogenetic
tree.
FEATURES Location/Qualifiers
source 1..825
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="DL2075H4"
/host="Homo sapiens"
/db_xref="taxon:11676"
/country="Guinea-Bissau"
/collection_date="29-Oct-2004"
gene <1..>825
/gene="env"
CDS <1..>825
/gene="env"
/note="V1-V3"
/codon_start="3"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="ADZ17420.1"
/db_xref="GI:325505133"
/translation="ILLKNVTEDFNMWKNNIVEQMNEDIISLWDQSLKPCVKLTPLCV
TLNCQNLNKSSDTSGNTSIDMQEEIKNCSFNMTTELRDKKQQVSALFYKLDVAQINNG
SQYRLINCNTSAITQACPKVTFEPIPIHYCAPAGFAILKCRDKTFNGTGPCKNVSTVQ
CTHGIKPVVSTQLLLNGSLAEEKVMIRSENITNNAKTIIAQLKTPVEITCIRPNNNTR
KSVRIGPGQTFYATGEIIGDIRQAHCNVSNSNWTSALQQVAAQLREYFNTTIIFTN"
BASE COUNT 318 a 149 c 154 g 204 t
ORIGIN
1 aaatactttt gaaaaatgta acagaagatt ttaacatgtg gaaaaataac atagtagaac
61 agatgaatga agatataatt agtctatggg accaaagcct aaagccatgt gtaaagttaa
121 cccctctctg cgttacttta aattgtcaga acctcaacaa aagtagcgac acctctggca
181 acacctctat tgacatgcaa gaggaaataa aaaattgctc tttcaatatg accacagaat
241 taagagataa gaaacagcaa gtgtctgcac ttttttataa acttgatgta gcacaaatta
301 ataatggaag ccagtataga ttaataaatt gtaatacctc agccattaca caggcttgtc
361 caaaggtaac ctttgagcca attcccatac attattgtgc cccagctggt tttgcaattc
421 taaagtgtag ggataagacg ttcaatggaa cagggccatg caagaatgtt agcacagtac
481 aatgtacaca tggaattaag ccagtagtat caactcaact gctgttaaat ggcagtctag
541 cagaagagaa ggtaatgatt agatctgaaa atatcacaaa taatgccaaa accataatag
601 cacagttgaa gacgccggta gaaatcacgt gtatcagacc taacaacaat acaaggaaaa
661 gtgtacgtat aggaccaggg caaacattct atgcaacagg tgaaataata ggggatataa
721 gacaagcaca ttgtaatgtc agtaactcaa actggactag cgctttacaa caggtggctg
781 cacaattaag ggagtacttt aacacaacaa taatctttac taact
//
last modified: Tue May 31 10:56 2022