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LOCUS	    HM638516		    2562 bp    DNA     linear	VRL 29-AUG-2010
DEFINITION  HIV-1 isolate 700010501_A7_BL from USA envelope glycoprotein (env)
	    gene, complete cds
ACCESSION   HM638516
VERSION     HM638516.1 GI:304417732
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 2562)
            Show all sequences for reference 1
  AUTHORS   Anderson,J.A., Ping,L.-H., Dibben,O., Jabara,C.B., Arney,L.,
	    Kincer,L., Tang,Y., Hobbs,M., Hoffman,I., Kazembe,P., Jones,C.D.,
	    Borrow,P., Fiscus,S., Cohen,M.S. and Swanstrom,R.
  TITLE     HIV-1 Populations in Semen Arise through Multiple Mechanisms.
  JOURNAL   PLoS Pathog. 2010 Aug 19;6(8). pii: e1001053.
  PUBMED    20808902
REFERENCE   2 (bases 1 to 2562)
            Show all sequences for reference 2
  AUTHORS   Anderson,J., Ping,L.-H., Dibben,O., Jabara,C., Arney,L., Kincer,L.,
	    Tang,Y., Hobbs,M., Hoffman,I., Kazembe,P., Jones,C., Borrow,P.,
	    Fiscus,S., Cohen,M. and Swanstrom,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-JUL-2010) Internal Medicine, University of North
	    Carolina, CB#7030, 130 Mason Farm Rd., Chapel Hill, NC 27599, USA
FEATURES             Location/Qualifiers
     source	     1..2562
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="700010501_A7_BL"
		     /isolation_source="semen"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="USA"
		     /collection_date="18-Feb-2008"
     gene	     1..2562
		     /gene="env"
     CDS	     1..2562
		     /gene="env"
		     /codon_start="1"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="ADM30189.1"
		     /db_xref="GI:304417733"
		     /translation="MRVMGIKKNWQCWKWGILLLGMLMISSATGQLWVTVYYGVPVWK
		     EATTTLFCASDAKAYDTEVHNIWATHACVPTDPNPQEIPLKNVTESFNMWKNNMVEQM
		     HEDIISLWDQSLKPCVSLTPLCVTLQCTDYHRTNGNNTDNRTDPSSSPVEREIKNCSF
		     NITTKRRDKMSKEYALFYKSDIVQINETGNDNNSYILTSCNTSVITQACPKVSFEPIP
		     IHYCTPAGFAILKCNDAKFNGSGQCKNVSTVQCTHGIRPVVSTQLLLNGSLAEEEIVI
		     RSENFSDNVKTIIVQLNESVEINCTRPNNNTRKSITIGPGRAFYATGDIIGDIRQAHC
		     NISKEKWNKTLKKVVDKLRQQFENKTIIFNQSSGGDPEIVMHKFICGGEFFYCNSTKL
		     FNSTWNGTRTEESKGENDTITLPCRIKQFINMWQRVGKAMYAPPISGKIRCSSNITGL
		     LLTRDGGINTTNETFRPGGGNMRDNWRSELYKYKVVRVEPLGVAPTKAKRRVVQREKR
		     AVTFGAVFLGFLGAAGSTMGAASVTLTVQARQLLSGIVQQQSNLLRAIEAQQHLLQLT
		     VWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICTTTVPWNASWSNKSLDMIWNNMT
		     WMEWEREIDNYTGLIYNLIEQSQNQQEINEQDLLKLDQWASLWNWFNISNWLWYIKIF
		     IMIIGGLVGLRIVFIVLSIVNRVRQGYSPLSFQTHHPAPRGPDRPEGIEEEGGERDRG
		     RSGPLVDGFLAIFWVDLRSLFLFSYHLLRDFLLIVTRTVELLGRRGWEALKYGWNLLQ
		     YWSQELRNSAISLLDAIAIAVAGGTDRVIEVIQRVFRGILHIPTRIRQGLERLLL"
BASE COUNT	896 a	 433 c	  597 g    636 t
ORIGIN
       1 atgagagtga tggggatcaa gaagaattgg caatgctgga aatggggcat cttgctcctt 
      61 gggatgttaa tgatcagtag tgctacagga caattgtggg tcacagtcta ttatggggta 
     121 cctgtgtgga aagaagcaac taccactcta ttttgtgcat cagatgctaa agcatatgac 
     181 acagaggtac ataatatttg ggctacacat gcctgtgtac ccacagaccc caacccacaa 
     241 gaaataccat tgaaaaatgt gacagaaagt tttaacatgt ggaaaaataa catggtagaa 
     301 caaatgcatg aggatataat cagtttatgg gatcaaagcc taaagccatg tgtaagctta 
     361 accccactct gtgttactct acaatgcact gattatcata gaactaatgg taataatact 
     421 gataatagga ctgatcctag tagtagtccc gtggaaagag aaataaaaaa ttgctctttc 
     481 aatatcacca caaagagaag agataagatg agtaaagaat atgccctttt ttataagtct 
     541 gatatagtac aaataaatga aacaggaaat gataataata gctatatatt gacaagttgt 
     601 aacacttcag ttattacaca agcctgtcca aaggtatcct ttgagccaat tcccatacat 
     661 tattgtaccc cggctggttt tgcgattcta aagtgtaatg atgcaaagtt caatggatca 
     721 ggacaatgca aaaatgtcag cacagtacaa tgtacacatg gaattaggcc agtagtatca 
     781 actcaactgc tgttaaatgg cagcctagca gaagaagaga tagtaattag atctgaaaat 
     841 ttctcggata atgtcaaaac cataatagta cagttgaatg aatctgtaga aattaattgc 
     901 acaagaccca acaacaatac aagaaaaagt ataactatag gaccagggag ggcattttat 
     961 gcaacaggag acataatagg agatataaga caagcacact gcaacattag taaagagaaa 
    1021 tggaataaaa ctttaaaaaa ggtagttgac aaattaagac aacaatttga gaataaaaca 
    1081 ataatcttta atcaatcctc aggaggggac ccagaaattg taatgcacaa gtttatttgt 
    1141 ggaggggaat ttttctactg taattcaaca aaactgttta atagtacctg gaatgggact 
    1201 aggactgaag agagcaaggg agaaaatgac acaatcacac tcccatgcag aataaaacaa 
    1261 tttataaaca tgtggcagag agtaggaaaa gcaatgtatg cccctcctat cagcggaaaa 
    1321 attagatgtt catcaaatat tacagggctg ttattaacaa gagatggtgg cattaacacc 
    1381 accaacgaga ccttcagacc tggaggagga aatatgaggg acaattggag aagtgaatta 
    1441 tataaatata aagtagtaag agttgaacca ttaggagtag cacctaccaa ggcaaagaga 
    1501 agagtggtgc aaagagaaaa aagagcagtg acatttggag ctgtgttcct tgggttcttg 
    1561 ggagcagcag gaagcactat gggcgcagcg tcagtgacgc tgacggtaca ggccagacaa 
    1621 ttattgtctg gtatagtgca acagcaaagt aatttgctga gggctattga ggcgcaacag 
    1681 catctgttgc aactcacagt ctggggcatc aagcagctcc aggcaagagt cctggctgtg 
    1741 gagagatacc tacgggatca acagctcctg gggatttggg gttgctctgg aaaactcatt 
    1801 tgcaccacta ctgtgccttg gaatgctagc tggagtaata aatctctgga tatgatttgg 
    1861 aataacatga cctggatgga gtgggaaagg gaaattgaca attacacagg cttaatatac 
    1921 aatttaattg aacaatcgca aaaccagcaa gaaataaatg aacaagactt attgaaatta 
    1981 gatcaatggg caagtttgtg gaattggttt aacatatcaa actggctgtg gtatataaaa 
    2041 atattcataa tgataatagg aggcttggta ggtttaagaa tagtttttat tgtactttct 
    2101 atagtgaata gagttaggca gggatactca ccattatcgt ttcagaccca ccacccagcc 
    2161 ccgaggggac ccgacaggcc cgaaggaatc gaagaagaag gtggagagag agacagaggc 
    2221 agatccggac cattagtgga tggattctta gcaattttct gggtcgacct acggagcctg 
    2281 ttccttttca gctaccacct cttgagagac tttctcttga ttgtaacgag gactgtggaa 
    2341 cttctgggac gcagggggtg ggaagccctc aagtacgggt ggaatctcct ccaatattgg 
    2401 agtcaggaac taaggaatag tgctattagt ttgcttgatg ccatagccat agcagtagct 
    2461 ggggggacag atagggttat agaagtaata caaagagttt ttagaggtat cctccatata 
    2521 cctacaagaa taagacaggg cttagaaaga cttttgctgt aa
//
last modified: Tue May 31 10:56 2022


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