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HIV Sequence Database



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LOCUS	    HM368232		    2559 bp    RNA     linear	VRL 18-SEP-2010
DEFINITION  HIV-1 isolate P1031-F2 from USA envelope glycoprotein (env) gene,
	    partial cds
ACCESSION   HM368232
VERSION     HM368232.1 GI:306847366
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 2559)
            Show all sequences for reference 1
  AUTHORS   Kishko,M., Somasundaran,M., Brewster,F., Sullivan,J.L.,
	    Clapham,P.R. and Luzuriaga,K.
  TITLE     Genotypic and functional properties of early infant HIV-1
	    envelopes.
  JOURNAL   Retrovirology.. 8(1); 67 (2011)
  PUBMED    21843318
REFERENCE   2 (bases 1 to 2559)
            Show all sequences for reference 2
  AUTHORS   Kishko,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-MAY-2010) Pediatric Immunology, UMass Medical School,
	    373 Plantation St Suite 318, Worcester, MA 01605, USA
FEATURES             Location/Qualifiers
     source	     1..2559
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="P1031-F2"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="USA"
		     /collection_date="1988"
		     /note="subtype: B"
     gene	     1..>2559
		     /gene="env"
     CDS	     1..>2559
		     /gene="env"
		     /codon_start="1"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="ADN06152.1"
		     /db_xref="GI:306847367"
		     /translation="MRVREIKKNCQHLWRWGIMLLGILMICNATDRLWVTVYYGVPVW
		     KEATTTLFCASDAKAYEPEVHNVWATHACVPTDPNPQEAVLENVTENFNMWKNNMVEQ
		     MHEDIISLWDQSLKPCVKLTPLCVTLNCTDLGNATNTNATNTNSSIEGMMEKGEIKNC
		     SFKVNTEIRDKVKKEHALFYRLDVVPIDNTSYRLISCNTSVITQACPKVSFEPIPIHY
		     CTPAGFAILKCNDKKFNGTGPCTSVSTVQCTHGISPVISTQLLLNGSLAEEEVIIRSA
		     NFSNNAKIIIVHLNESVEINCTRPNNNTRKSIHIGPGRAFYTTGEIIGDIRQAHCNLS
		     RAKWNDTLQRIAIKLREQFGNETTIVFNQSSGGDPEIVMHSFNCGGEFFYCNTTQLFN
		     STWNSNGGPNNTGGNDTITLPCRIKQIINMWQEVGKAMYAPPIRGQIRCSSNITGLLL
		     TRDGGNNGTTGTEVFRPGGGDMRDNWRSELYKYKVVQIEPLGVAPTKAKRRVVQREKR
		     AVGIGAVFLGFLGAAGSTMGAASMTLTVQARLLLSGIVQQQNNLLRAIEAQQHLLQLT
		     VWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTAVPWNASWSNKSLDEIWDNMT
		     WMEWDREINNYTNLIYTLIEKSQNQQEKNEQELLELDKWASLWNWFDITNWLWYIKIF
		     IMIVGGLIGLRIVFTVLSIVNRVRQGYSPLSFQTHPPAARGPDRPEGIEEEGGERDRD
		     RSGPFVNGFLTLIWIDLRSLCLFLYHRLRDLLLIAARIVELLGRRGWEVLKYWWNILQ
		     YWSQELKSSAVSLLNATAIAVAEGTDRVIEGLQRAFRAILNIPVRIRQGLERALL"
BASE COUNT	886 a	 441 c	  611 g    621 t
ORIGIN
       1 atgagagtga gggagatcaa gaagaattgt cagcacttgt ggagatgggg catcatgctc 
      61 cttgggatat taatgatctg taatgctaca gacaggttgt gggtcacagt ttattatggg 
     121 gtacctgtgt ggaaagaagc aaccaccact ctattttgtg catcagatgc taaagcatat 
     181 gagccagagg tacataatgt ttgggccaca catgcctgtg tacccacaga ccccaaccca 
     241 caagaagcag tattggaaaa tgtgacagaa aattttaaca tgtggaaaaa taacatggta 
     301 gaacagatgc atgaggatat aatcagttta tgggatcaaa gcctaaagcc atgtgtaaag 
     361 ttaaccccac tctgtgttac tttaaattgc actgatttgg ggaatgctac taataccaat 
     421 gctactaata ccaatagtag tatcgaggga atgatggaga aaggagaaat aaaaaactgc 
     481 tcattcaaag tcaacacaga gataagagat aaggtgaaga aagaacatgc acttttttat 
     541 aggcttgatg tagtaccaat agataataca agctataggt tgataagttg taacacctca 
     601 gtcattacac aggcctgtcc aaaggtatct tttgagccaa ttcccataca ttattgtacc 
     661 ccggctggtt ttgcgattct aaaatgtaat gataagaagt tcaatggaac aggaccatgt 
     721 acaagtgtaa gcacagtaca atgtacacat ggaattagcc cagtaatatc aactcaactg 
     781 ctgttaaatg gcagtctagc agaagaagag gtgataatca gatccgccaa tttctcgaac 
     841 aatgctaaaa tcataatagt acatctgaat gaatctgtag aaattaattg tacaagaccc 
     901 aacaacaata caagaaaaag tatacatata ggaccaggca gagcatttta tacaacagga 
     961 gaaataatag gagatataag acaagcacat tgtaacctta gtagagcaaa atggaatgac 
    1021 actttacaac ggatagctat aaaattaaga gaacaatttg ggaatgaaac aacaatagtc 
    1081 tttaatcaat cctcaggagg ggacccagaa attgtaatgc acagttttaa ttgtggaggg 
    1141 gaatttttct actgtaatac aacacaactg tttaatagta cttggaatag taatggagga 
    1201 ccaaataaca ctggaggaaa tgacacaatc acactcccat gcagaataaa acaaattata 
    1261 aacatgtggc aggaagtagg aaaagcaatg tatgcccctc ccatcagagg acaaattaga 
    1321 tgttcatcaa atattacagg gctgctatta acaagagatg gtggtaacaa tgggaccacc 
    1381 gggaccgagg tcttcagacc tggaggagga gatatgaggg acaattggag aagtgaatta 
    1441 tataaatata aagtagtaca aattgaacca ttaggagtag cacccaccaa ggcaaagaga 
    1501 agagtggtgc agagagaaaa aagagcagtg ggaataggag ctgtgttcct tgggttcttg 
    1561 ggagcagcag gaagcactat gggcgcagcg tcaatgacgc tgacggtaca ggccagacta 
    1621 ttattgtctg gtatagtgca acagcagaac aatttgctga gggctattga ggcgcaacag 
    1681 catctgttgc aactcacagt ctggggcatc aagcagctcc aggcaagagt cctggctgtg 
    1741 gaaagatacc taaaggatca acagctcctg gggatttggg gttgctctgg aaaactcatt 
    1801 tgcaccactg ctgtgccttg gaacgctagt tggagtaata aatctctgga tgagatttgg 
    1861 gataacatga cctggatgga gtgggacaga gaaattaaca attacacaaa cttaatatac 
    1921 accttaattg aaaaatcgca gaaccaacaa gaaaagaatg aacaagaatt attagaatta 
    1981 gataaatggg caagtttgtg gaattggttt gacataacaa attggctgtg gtatataaaa 
    2041 atattcataa tgatagtagg aggcttgata ggtttaagaa tagtttttac tgtactttct 
    2101 atagtgaata gagttaggca gggatactca ccattatcgt ttcagaccca ccccccagcc 
    2161 gcgaggggac ccgacaggcc cgaaggaata gaagaagaag gtggagagag agacagagac 
    2221 agatccggtc catttgtcaa cggattctta acacttatct ggatcgatct gcggagcctg 
    2281 tgcctcttcc tctaccaccg cttgagagac ttactcttga ttgcagcgag gattgtggaa 
    2341 cttctgggac gcagggggtg ggaagtcctc aaatattggt ggaatatcct acagtattgg 
    2401 agtcaggaac taaagagtag tgctgttagt ttgcttaatg ccacagccat agcagtagct 
    2461 gaggggacag atagggttat agaaggatta caaagagctt ttagagctat tctcaacata 
    2521 cctgtaagaa taagacaggg cttggaaagg gctttgcta
//
last modified: Tue May 31 10:56 2022


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