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LOCUS	    HM026324		     669 bp    RNA     linear	VRL 08-JUN-2011
DEFINITION  HIV-1 isolate B.KH03-0365RT(N0709363) from Cambodia reverse
	    transcriptase (pol) gene, partial cds
ACCESSION   HM026324
VERSION     HM026324.1 GI:297595242
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 669)
            Show all sequences for reference 1
  AUTHORS   Ferradini,L., Ouk,V., Segeral,O., Nouhin,J., Dulioust,A., Hak,C.,
	    Fournier,I., Lerolle,N., Ngin,S., Mean,C.V., Delfraissy,J.-F. and
	    Nerrienet,E.
  TITLE     High efficacy of lopinavir/r-based second-line antiretroviral
	    treatment after 24 months of follow up at ESTHER/Calmette Hospital
	    in Phnom Penh, Cambodia.
  JOURNAL   J Int AIDS Soc. 2011 Mar 26;14:14.
  PUBMED    21439074
REFERENCE   2 (bases 1 to 669)
            Show all sequences for reference 2
  AUTHORS   Ferradini,L., Ouk,V., Segeral,O., Nouhin,J., Dulioust,A., Hak,C.,
	    Fournier,I., Lerolle,N., Ngin,S., Mean,C.V., Delfraissy,J.-F. and
	    Nerrienet,E.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAR-2010) HIV/Hepatitis Laboratory, Institut Pasteur
	    du Cambodge, 5, Monivong Blvd, Phnom Penh BP983, Cambodia
FEATURES             Location/Qualifiers
     source	     1..669
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="B.KH03-0365RT(N0709363)"
		     /isolation_source="plasma of HIV-1 infected and ARV
		     treated patient"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="Cambodia"
		     /collection_date="Mar-2005"
		     /note="genotype: B"
     gene	     <1..>669
		     /gene="pol"
     CDS	     <1..>669
		     /gene="pol"
		     /codon_start="1"
		     /transl_table="1"
		     /product="reverse transcriptase"
		     /protein_id="ADI48142.1"
		     /db_xref="GI:297595243"
		     /translation="MDGPKVKQWPLTEEKIKALVEICTFLEEEGKISKIGPENPYNTP
		     VFAIKKKNSTKWRKIVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTILDVGDAYFS
		     IPLDKDFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQN
		     PDIVICQYVDDLYVGSDLEIEQHRTKIEELRNHLWKWGFYTPDNKHQKEPPFLWMGYE
		     LHPDK"
BASE COUNT	268 a	 106 c	  131 g    163 t      1 other
ORIGIN
       1 atggatggcc caaaagttaa acaatggcca ttgacagaag aaaaaataaa agcmttagta 
      61 gaaatttgta catttttgga agaggaagga aaaatttcaa aaattgggcc tgaaaatcca 
     121 tacaatactc cagtatttgc cataaagaaa aaaaacagta ctaaatggag aaaaatagta 
     181 gatttcagag aacttaataa aagaactcaa gacttctggg aggttcaatt aggaatacca 
     241 catcctgcag ggttaaaaaa gaaaaaatcg gtaacaatac tggatgtggg tgatgcatat 
     301 ttttcaattc ccttagataa agacttcagg aagtatactg catttactat acctagtacg 
     361 aacaatgaga caccaggtat tagatatcag tacaatgtgc ttccacaggg atggaaagga 
     421 tcaccagcaa tattccaaag tagcatgaca aaaatcttag agccttttag aaaacaaaat 
     481 ccagacatag ttatttgtca atacgtggat gatttgtatg taggatctga cttagaaata 
     541 gagcagcata gaacaaaaat agaggaactg agaaaccatc tgtggaagtg gggattttac 
     601 acaccagaca acaaacatca gaaagaacct ccattccttt ggatgggtta tgaactccat 
     661 cctgataag
//
last modified: Tue May 31 10:56 2022


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