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LOCUS HM026324 669 bp RNA linear VRL 08-JUN-2011
DEFINITION HIV-1 isolate B.KH03-0365RT(N0709363) from Cambodia reverse
transcriptase (pol) gene, partial cds
ACCESSION HM026324
VERSION HM026324.1 GI:297595242
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 669)
Show all sequences for reference 1
AUTHORS Ferradini,L., Ouk,V., Segeral,O., Nouhin,J., Dulioust,A., Hak,C.,
Fournier,I., Lerolle,N., Ngin,S., Mean,C.V., Delfraissy,J.-F. and
Nerrienet,E.
TITLE High efficacy of lopinavir/r-based second-line antiretroviral
treatment after 24 months of follow up at ESTHER/Calmette Hospital
in Phnom Penh, Cambodia.
JOURNAL J Int AIDS Soc. 2011 Mar 26;14:14.
PUBMED 21439074
REFERENCE 2 (bases 1 to 669)
Show all sequences for reference 2
AUTHORS Ferradini,L., Ouk,V., Segeral,O., Nouhin,J., Dulioust,A., Hak,C.,
Fournier,I., Lerolle,N., Ngin,S., Mean,C.V., Delfraissy,J.-F. and
Nerrienet,E.
TITLE Direct Submission
JOURNAL Submitted (22-MAR-2010) HIV/Hepatitis Laboratory, Institut Pasteur
du Cambodge, 5, Monivong Blvd, Phnom Penh BP983, Cambodia
FEATURES Location/Qualifiers
source 1..669
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="B.KH03-0365RT(N0709363)"
/isolation_source="plasma of HIV-1 infected and ARV
treated patient"
/host="Homo sapiens"
/db_xref="taxon:11676"
/country="Cambodia"
/collection_date="Mar-2005"
/note="genotype: B"
gene <1..>669
/gene="pol"
CDS <1..>669
/gene="pol"
/codon_start="1"
/transl_table="1"
/product="reverse transcriptase"
/protein_id="ADI48142.1"
/db_xref="GI:297595243"
/translation="MDGPKVKQWPLTEEKIKALVEICTFLEEEGKISKIGPENPYNTP
VFAIKKKNSTKWRKIVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTILDVGDAYFS
IPLDKDFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQN
PDIVICQYVDDLYVGSDLEIEQHRTKIEELRNHLWKWGFYTPDNKHQKEPPFLWMGYE
LHPDK"
BASE COUNT 268 a 106 c 131 g 163 t 1 other
ORIGIN
1 atggatggcc caaaagttaa acaatggcca ttgacagaag aaaaaataaa agcmttagta
61 gaaatttgta catttttgga agaggaagga aaaatttcaa aaattgggcc tgaaaatcca
121 tacaatactc cagtatttgc cataaagaaa aaaaacagta ctaaatggag aaaaatagta
181 gatttcagag aacttaataa aagaactcaa gacttctggg aggttcaatt aggaatacca
241 catcctgcag ggttaaaaaa gaaaaaatcg gtaacaatac tggatgtggg tgatgcatat
301 ttttcaattc ccttagataa agacttcagg aagtatactg catttactat acctagtacg
361 aacaatgaga caccaggtat tagatatcag tacaatgtgc ttccacaggg atggaaagga
421 tcaccagcaa tattccaaag tagcatgaca aaaatcttag agccttttag aaaacaaaat
481 ccagacatag ttatttgtca atacgtggat gatttgtatg taggatctga cttagaaata
541 gagcagcata gaacaaaaat agaggaactg agaaaccatc tgtggaagtg gggattttac
601 acaccagaca acaaacatca gaaagaacct ccattccttt ggatgggtta tgaactccat
661 cctgataag
//
last modified: Tue May 31 10:56 2022