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LOCUS GU966550 882 bp RNA linear VRL 21-APR-2010
DEFINITION HIV-2 isolate 19990547 from Luxembourg integrase (pol) gene,
partial cds
ACCESSION GU966550
VERSION GU966550.1 GI:294829044
KEYWORDS .
SOURCE Human immunodeficiency virus 2 (HIV-2)
ORGANISM Human immunodeficiency virus 2 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 882)
Show all sequences for reference 1
AUTHORS Perez-Bercoff,D., Triqueneaux,P., Lambert,C., Oumar,A.A.,
Ternes,A.-M., Goubau,P., Schmit,J.-C. and Ruelle,J.P.
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2010) AIDS Reference Laboratory, UC Louvain,
Avenue Hippocrate 54 - UCL 5492, Bruxelles 1200, Belgium
REFERENCE 2
Show all sequences for reference 2
AUTHORS Perez Bercoff,D., Trinqueneaux,P., Lambert,C., Oumar,A.A.,
Ternes,A.M., Dao,S., Goubau,P., Schmit,J.C. and Ruelle,J.
TITLE Polymorphisms of HIV-2 integrase and selection of resistance to
raltegravir
JOURNAL Retrovirology 7 (1), 98 (2010)
PUBMED 21114823
FEATURES Location/Qualifiers
source 1..882
/organism="Human immunodeficiency virus 2"
/mol_type="genomic RNA"
/isolate="19990547"
/host="Homo sapiens"
/db_xref="taxon:11709"
/country="Luxembourg"
/collection_date="14-Oct-1999"
/note="group: A"
gene <1..882
/gene="pol"
CDS <1..882
/gene="pol"
/codon_start="1"
/transl_table="1"
/product="integrase"
/protein_id="ADF42957.1"
/db_xref="GI:294829045"
/translation="FLERIEPAQEEHEKYHSNVKELSHKFGIPKLVARQIVNTCAQCQ
QKGEAIHGQVNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLL
KLASRWPITHLHTDNGANFTSQEVKMVAWWVGIEQSFGVPYNPQSQGVVEAMNHHLKN
QISKIREQANTIETIVLMAVHCMNFKRRGGIGDMTPAERLINMITTEQEIQFLXAKNS
KFKNFQVYYREGRDQQWKGPGELLWKGEGAVIVKVGADIKIIPRRKAKIIKDYGGRQE
LDSGXHLEGAREDGEVA"
BASE COUNT 339 a 152 c 211 g 165 t 15 other
ORIGIN
1 tttctagaaa gaatagagcc cgctcaggaa gaacatgaaa aataycatag caatgtaaaa
61 gaactatccc ataaatttgg aatacccaaa ctagtggcaa gacagatagt aaacacatgt
121 gcccaatgtc aacagaaagg ggargctata catgggcaag taaatgcaga attaggyacc
181 tggcaaatgg actgcacaca cttagaagga aagatcatta tagtrgcagt acatgttgcw
241 agtgggttta tagaagcaga agtcatccca caggaatcag gaaggcaaac rgcactcttc
301 ctrttaaaac tggccagcag gtggccaata acacacttac atacagataa tggtgccaac
361 ttcacctcac aggargtgaa gatggtagca tggtgggtag gcatagarca atcctttgga
421 gtaccttaca atccacaaag ccaaggagta gtagaagcaa tgaatcacca cctaaaaaat
481 cagataagca aaattagaga rcaggcaaat acaatagaaa caatagtatt aatggcagtt
541 cattgcatga attttaaaag aaggggagga ataggggata tgacaccagc agaaagayta
601 atcaatatga tcaccacaga acargaaata caattyctcc amgcaaaaaa ttcaaaattt
661 aaaaattttc aggtctatta cagagaaggc agagaccagc agtggaaagg ccctggggag
721 ctactgtgga agggagaagg cgcagtcata gtcaaggtag gggcagacat aaaaataata
781 ccaagaagaa aagccaagat catcaaggac tatggaggaa ggcaagagtt ggatagtggt
841 ycccacttgg agggtgccag ggaggatgga gaagtggcat ag
//
last modified: Tue May 31 10:56 2022