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LOCUS GU471370 346 bp RNA linear VRL 19-JUL-2010
DEFINITION HIV-1 isolate ZPHI41-11 from Switzerland envelope glycoprotein
(env) gene, partial cds
ACCESSION GU471370
VERSION GU471370.1 GI:300510206
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 346)
Show all sequences for reference 1
AUTHORS Rieder,P., Joos,B., von Wyl,V., Kuster,H., Grube,C., Leemann,C.,
Boni,J., Yerly,S., Klimkait,T., Burgisser,P., Weber,R., Fischer,M.
and Gunthard,H.F.
CONSRTM Swiss HIV Cohort Study
TITLE HIV-1 transmission after cessation of early antiretroviral therapy
among men having sex with men
JOURNAL AIDS 24 (8), 1177-1183 (2010)
PUBMED 20386427
REFERENCE 2 (bases 1 to 346)
Show all sequences for reference 2
AUTHORS Joos,B.
CONSRTM Swiss HIV Cohort Study
TITLE Direct Submission
JOURNAL Submitted (15-JAN-2010) Infectious Diseases, University Hospital
Zurich, Ramistr. 100, Zurich CH-8091, Switzerland
FEATURES Location/Qualifiers
source 1..346
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="ZPHI41-11"
/isolation_source="patient ZPHI41 2003-12-12 plasma"
/host="Homo sapiens"
/db_xref="taxon:11676"
/country="Switzerland"
/collection_date="12-Dec-2003"
/note="subtype: B"
gene <1..>346
/gene="env"
CDS <1..>346
/gene="env"
/note="gp120; C2-V3-C3 region"
/codon_start="3"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="ADK24368.1"
/db_xref="GI:300510207"
/translation="THGIRPVVSTQLLLNGSLAEEEVIIRSENFTDNIKNIIVQLKHS
VKINCTRPGNNTRKSIHIGPGRAFFARGDITGDIRKAYCNISGTDWNSTLSQTVTALR
KQFGNKTIVFKPP"
BASE COUNT 146 a 53 c 67 g 80 t
ORIGIN
1 gtacacatgg aattaggcca gtagtgtcaa ctcaactgct gttaaatggc agtctggcag
61 aagaagaggt aataattaga tctgaaaatt tcacagacaa tattaaaaac ataatagtac
121 agctaaaaca ctctgtaaaa attaattgca caagacccgg taacaataca aggaaaagta
181 tacatatagg accagggaga gcattttttg caagaggaga tataacagga gatataagaa
241 aagcatattg taacattagt ggaacagatt ggaatagcac tttaagccag acagttacag
301 cattaagaaa acaatttggg aacaaaacaa tagtctttaa acctcc
//
last modified: Tue May 31 10:56 2022