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LOCUS	    GU471347		     346 bp    RNA     linear	VRL 19-JUL-2010
DEFINITION  HIV-1 isolate ZPHI28-04 from Switzerland envelope glycoprotein
	    (env) gene, partial cds
ACCESSION   GU471347
VERSION     GU471347.1 GI:300510160
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 346)
            Show all sequences for reference 1
  AUTHORS   Rieder,P., Joos,B., von Wyl,V., Kuster,H., Grube,C., Leemann,C.,
	    Boni,J., Yerly,S., Klimkait,T., Burgisser,P., Weber,R., Fischer,M.
	    and Gunthard,H.F.
  CONSRTM   Swiss HIV Cohort Study
  TITLE     HIV-1 transmission after cessation of early antiretroviral therapy
	    among men having sex with men
  JOURNAL   AIDS 24 (8), 1177-1183 (2010)
  PUBMED    20386427
REFERENCE   2 (bases 1 to 346)
            Show all sequences for reference 2
  AUTHORS   Joos,B.
  CONSRTM   Swiss HIV Cohort Study
  TITLE     Direct Submission
  JOURNAL   Submitted (15-JAN-2010) Infectious Diseases, University Hospital
	    Zurich, Ramistr. 100, Zurich CH-8091, Switzerland
FEATURES             Location/Qualifiers
     source	     1..346
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="ZPHI28-04"
		     /isolation_source="patient ZPHI28 2003-03-31 plasma"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="Switzerland"
		     /collection_date="31-Mar-2003"
		     /note="subtype: B"
     gene	     <1..>346
		     /gene="env"
     CDS	     <1..>346
		     /gene="env"
		     /note="gp120; C2-V3-C3 region"
		     /codon_start="3"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="ADK24345.1"
		     /db_xref="GI:300510161"
		     /translation="THGIRPVVSTQLLLNGSLAEEEVIIRSENFTDNTKNIIVQLKDS
		     VKINCTRPNNNTRKSIHIAPGRAFFATGDITGNIRQAHCNISGTDWNSTLHQTVTALR
		     KQYGNRTIVFKPP"
BASE COUNT	148 a	  58 c	   63 g     77 t
ORIGIN
       1 gtacacatgg aattaggcca gtagtgtcaa ctcaactgct gttaaatggc agtctggcag 
      61 aagaagaggt aataattaga tctgaaaatt tcacagacaa tactaaaaac ataatagtac 
     121 agctaaaaga ctctgtaaaa attaattgca caagacccaa taacaataca aggaaaagta 
     181 tacatatagc accagggaga gcattttttg caacaggaga tataacagga aatataagac 
     241 aagcacattg taacattagt ggaacagatt ggaatagcac tttacaccag acagttacag 
     301 cattaagaaa acaatatggg aacagaacaa tagtctttaa acctcc
//
last modified: Tue May 31 10:56 2022


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