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LOCUS GU471347 346 bp RNA linear VRL 19-JUL-2010
DEFINITION HIV-1 isolate ZPHI28-04 from Switzerland envelope glycoprotein
(env) gene, partial cds
ACCESSION GU471347
VERSION GU471347.1 GI:300510160
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 346)
Show all sequences for reference 1
AUTHORS Rieder,P., Joos,B., von Wyl,V., Kuster,H., Grube,C., Leemann,C.,
Boni,J., Yerly,S., Klimkait,T., Burgisser,P., Weber,R., Fischer,M.
and Gunthard,H.F.
CONSRTM Swiss HIV Cohort Study
TITLE HIV-1 transmission after cessation of early antiretroviral therapy
among men having sex with men
JOURNAL AIDS 24 (8), 1177-1183 (2010)
PUBMED 20386427
REFERENCE 2 (bases 1 to 346)
Show all sequences for reference 2
AUTHORS Joos,B.
CONSRTM Swiss HIV Cohort Study
TITLE Direct Submission
JOURNAL Submitted (15-JAN-2010) Infectious Diseases, University Hospital
Zurich, Ramistr. 100, Zurich CH-8091, Switzerland
FEATURES Location/Qualifiers
source 1..346
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="ZPHI28-04"
/isolation_source="patient ZPHI28 2003-03-31 plasma"
/host="Homo sapiens"
/db_xref="taxon:11676"
/country="Switzerland"
/collection_date="31-Mar-2003"
/note="subtype: B"
gene <1..>346
/gene="env"
CDS <1..>346
/gene="env"
/note="gp120; C2-V3-C3 region"
/codon_start="3"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="ADK24345.1"
/db_xref="GI:300510161"
/translation="THGIRPVVSTQLLLNGSLAEEEVIIRSENFTDNTKNIIVQLKDS
VKINCTRPNNNTRKSIHIAPGRAFFATGDITGNIRQAHCNISGTDWNSTLHQTVTALR
KQYGNRTIVFKPP"
BASE COUNT 148 a 58 c 63 g 77 t
ORIGIN
1 gtacacatgg aattaggcca gtagtgtcaa ctcaactgct gttaaatggc agtctggcag
61 aagaagaggt aataattaga tctgaaaatt tcacagacaa tactaaaaac ataatagtac
121 agctaaaaga ctctgtaaaa attaattgca caagacccaa taacaataca aggaaaagta
181 tacatatagc accagggaga gcattttttg caacaggaga tataacagga aatataagac
241 aagcacattg taacattagt ggaacagatt ggaatagcac tttacaccag acagttacag
301 cattaagaaa acaatatggg aacagaacaa tagtctttaa acctcc
//
last modified: Tue May 31 10:56 2022