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LOCUS GU471287 343 bp RNA linear VRL 19-JUL-2010
DEFINITION HIV-1 isolate ZPHI67-08 from Switzerland envelope glycoprotein
(env) gene, partial cds
ACCESSION GU471287
VERSION GU471287.1 GI:300510042
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 343)
Show all sequences for reference 1
AUTHORS Rieder,P., Joos,B., von Wyl,V., Kuster,H., Grube,C., Leemann,C.,
Boni,J., Yerly,S., Klimkait,T., Burgisser,P., Weber,R., Fischer,M.
and Gunthard,H.F.
CONSRTM Swiss HIV Cohort Study
TITLE HIV-1 transmission after cessation of early antiretroviral therapy
among men having sex with men
JOURNAL AIDS 24 (8), 1177-1183 (2010)
PUBMED 20386427
REFERENCE 2 (bases 1 to 343)
Show all sequences for reference 2
AUTHORS Joos,B.
CONSRTM Swiss HIV Cohort Study
TITLE Direct Submission
JOURNAL Submitted (15-JAN-2010) Infectious Diseases, University Hospital
Zurich, Ramistr. 100, Zurich CH-8091, Switzerland
FEATURES Location/Qualifiers
source 1..343
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="ZPHI67-08"
/isolation_source="patient ZPHI67 2004-10-21 plasma"
/host="Homo sapiens"
/db_xref="taxon:11676"
/country="Switzerland"
/collection_date="21-Oct-2004"
/note="subtype: B"
gene <1..>343
/gene="env"
CDS <1..>343
/gene="env"
/note="gp120; C2-V3-C3 region"
/codon_start="3"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="ADK24287.1"
/db_xref="GI:300510043"
/translation="THGIRPVVSTQLLLNGSLAEEEVVIRSENFMENTKNIIVQLNES
VQINCTRPNNNTRKSIHLGPGAAFYATGDIIGDIRQAHCNLSEEQWNKTLKQVVTKLK
EQFNKTIVFTQP"
BASE COUNT 151 a 52 c 60 g 80 t
ORIGIN
1 gtacacatgg aattaggcca gtagtgtcaa ctcaactgct gttaaatggc agtctagcag
61 aagaagaggt agtaattaga tctgaaaatt tcatggaaaa tactaaaaac ataatagtac
121 aactgaatga atctgtacaa attaattgta caagacccaa caacaataca agaaaaagta
181 tacatctagg accaggggca gcattctatg caacaggaga tataatagga gatataagac
241 aagcacattg taaccttagt gaagaacaat ggaataaaac tttaaaacag gtagttacaa
301 aattaaaaga acaatttaat aaaacaatag tctttactca gcc
//
last modified: Tue May 31 10:56 2022