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LOCUS GU191442 2598 bp RNA linear VRL 09-FEB-2010
DEFINITION HIV-1 isolate 091-WK48 clone 10 from Canada envelope glycoprotein
(env) gene, complete cds
ACCESSION GU191442
VERSION GU191442.1 GI:288189454
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 2598)
Show all sequences for reference 1
AUTHORS McNicholas,P., Wei,Y., Whitcomb,J., Greaves,W., Black,T.A.,
Tremblay,C.L. and Strizki,J.M.
TITLE Characterization of emergent HIV resistance in treatment-naive
subjects enrolled in a vicriviroc phase 2 trial.
JOURNAL J. Infect. Dis.. 201(10); 1470-80 (2010)
PUBMED 20373959
REFERENCE 2 (bases 1 to 2598)
Show all sequences for reference 2
AUTHORS McNicholas,P., Wei,Y., Whitcomb,J., Greaves,W., Black,T.A.,
Tremblay,C.L. and Strizki,J.M.
TITLE Direct Submission
JOURNAL Submitted (11-NOV-2009) Biological Research-Virology, Schering
Plough Research Institute, 2015 Galloping Hill Road, K15/
E405/4945, Kenilworth, NJ 07033, USA
COMMENT Sampling date corrected by authors; it is Jan 11, 2005, not Nov
1,2005 [JM 8/2010].
FEATURES Location/Qualifiers
source 1..2598
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="091-WK48"
/isolation_source="plasma sample of subject enrolled in a
clinical trial"
/host="Homo sapiens"
/db_xref="taxon:11676"
/clone="10"
/country="Canada"
/collection_date="03-Nov-2005"
gene 1..2598
/gene="env"
CDS 1..2598
/gene="env"
/codon_start="1"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="ADC43123.1"
/db_xref="GI:288189455"
/translation="MRVKGIKRNYPHLWIWGTMLLGMLLMSYSAANNLWVTVYYGVPV
WKEANATLFCASDAKAYETEAHNIWATHACVPTDPNPQEIELKNVTEDFNMWKNNMVE
QMHEDIISLWDQSLKPCVKLTPLCVTLNCTNAISENNCTNTTLNSDSNNATLGNNCSI
PEMRNCSFNVTTVLRDKQKQEYALFYKLDIVGIGLDNTSYRLINCNTSAMTQACPKIS
FEPIPIHYCAPAGFAILKCNDKKFNGTGPCKNVSTVQCTHGIRPVVSTQLLLNGSLAE
EEIIIRSENLTNNAKNIIVQFNESVKIICIRPNNNTIKSVHLGPGEAFYATNGIIGDI
RKAHCNITRTAWNNTLQKVAKTLGELYNETSIIFKPSSGGDSEITTHSFNCGGEFFYC
NTSGLFNGTWINNTWTWLNSTKNNETNTNVTIPCRIKQIINMWQRVGKAMYAPPIKGV
IKCTSNITGIILTRDGGKNATNETFRPGGGNMKDNWRSELYKYKVVRIEPLGVAPTRA
KRRVVEREKRAIGLGAVFLGFLGAAGSTMGAASLTLTVQARQLLSGIVQQQNNLLRAI
EAQQHLLQLTVWGIKQLQARILAVERYLKDQQFLGVWGCSGKHICTTNVPWNSSWSKN
KSLDYIWQNMTWRQWEKEIEQYAGVIYTLIEESQIQQENNEKELLELDKWANLWNWFD
ITQWLWYIKIFIMIVGGLIGLRIVFAILSIVRRVRQGYSPLSFQTLFPIPRGRPDGPE
GIEEEGGEQGRGNSIRLVNGFLALFWDDLRNLCLFSYHRLRDLVLITARIVDLLGRRG
WEALKYLWNLLGYWSQELKNSAISLYNATAIAVAEGTDRIIEIVQRACRAILNIPRRI
RQGLERALL"
BASE COUNT 932 a 446 c 594 g 626 t
ORIGIN
1 atgagagtga aggggataaa gaggaattat ccacacttgt ggatatgggg caccatgctc
61 cttgggatgt tgctgatgag ctatagtgca gcaaataatt tgtgggttac agtgtattat
121 ggggtgcctg tatggaaaga agcaaatgcc actctatttt gtgcatcaga tgctaaagca
181 tatgaaacag aggcacataa tatctgggct acacatgcct gtgtacccac ggaccccaac
241 ccacaggaaa tagaactaaa aaatgtcaca gaggatttta acatgtggaa aaataacatg
301 gtggaacaga tgcatgagga tataatcagt ctatgggacc agagcctaaa accatgtgta
361 aaattaaccc cactatgtgt cactttaaat tgcacgaatg ctatatcgga aaacaactgc
421 actaatacta cattgaacag cgacagcaat aatgctacat tgggaaacaa ctgcagcatc
481 ccagaaatga gaaactgctc tttcaatgta accacagtat taagggataa acaaaagcaa
541 gaatatgcac ttttttataa acttgatata gtaggaatag gtcttgataa tacttcttat
601 aggttaataa attgtaatac ctcagccatg acacaggctt gtccaaagat atcctttgag
661 ccaattccca tacattattg tgccccagct ggatttgcaa ttctaaaatg taatgataag
721 aaattcaatg gaacaggccc atgcaaaaat gttagcacag tacaatgtac acatggaatc
781 aggccagtag tgtcaactca attgctgtta aatggcagtc tagcagaaga agagatcata
841 attagatctg agaatctcac aaacaatgct aaaaacataa tagtgcaatt taatgaatct
901 gtaaaaatta tttgtataag gcctaacaac aatacaataa aaagtgtaca cttaggacca
961 ggggaggcat tctatgcaac aaacggaata ataggagaca taaggaaagc acattgtaat
1021 attactagga cagcctggaa taacacgcta caaaaggtag ccaaaacatt aggagaactc
1081 tataacgaaa caagcataat ttttaaacca tcctcaggag gagactcaga aattacaaca
1141 cacagtttta attgtggagg ggaatttttc tactgcaata catcaggact gtttaatgga
1201 acatggatta acaatacatg gacatggctt aacagtacaa agaataatga aactaataca
1261 aatgtaacca tcccatgtag aataaaacaa attataaaca tgtggcagag agtaggaaaa
1321 gcaatgtatg cccctcccat caaaggagta attaagtgta catcaaatat tacagggata
1381 atattgacaa gagatggtgg taagaatgct actaatgaga ccttcaggcc tggaggagga
1441 aacatgaagg acaattggag aagtgaatta tataaatata aagtagtaag aattgaacca
1501 ttaggagtag cacctaccag ggcaaagaga agagtggtgg aaagagaaaa aagagcaata
1561 ggactaggag ctgtgttcct tggtttcttg ggagcagcag gaagcacgat gggcgcagcg
1621 tcattgacgc tgacggtaca ggccagacaa ttattgtctg gtatagtgca acagcaaaat
1681 aatttgctga gggctataga ggcgcaacaa catctgttgc aactcacggt ctggggcatt
1741 aaacagctcc aggcaagaat cctggctgtg gaaagatacc taaaggatca acagttccta
1801 ggagtttggg gttgctctgg aaaacacatt tgcaccacta atgtaccctg gaactctagt
1861 tggagtaaga ataaatctct agactatatt tggcagaaca tgacatggag gcaatgggag
1921 aaagaaattg aacaatacgc aggggtaata tacacattaa ttgaagaatc acaaatccag
1981 caagaaaaca atgaaaagga attattagaa ttggacaaat gggcaaattt gtggaattgg
2041 tttgacataa ctcaatggct gtggtatata aaaatattca ttatgatagt agggggctta
2101 ataggtttga gaatagtttt tgctatactt tctatagtaa gaagagttag gcagggatac
2161 tcacctctgt cgtttcagac ccttttcccg atcccgaggg gacgacccga cgggcccgaa
2221 ggaatagaag aagaaggtgg agagcaaggc agaggcaact caattcgatt ggtgaacgga
2281 ttcttagcac tcttctggga cgacctgagg aacctgtgcc tcttcagcta ccaccgcttg
2341 agagacttag tcttaatcac agcgaggatt gtggaccttc tgggacgcag ggggtgggaa
2401 gcactcaaat atctgtggaa tctcctaggg tattggagtc aggaactgaa gaatagtgct
2461 attagtttgt ataacgccac agcaatagca gtagctgagg ggacagatag gatcatagaa
2521 atagtacaga gagcttgtag ggctattctt aacataccca gaagaataag acaaggttta
2581 gaaagagctt tgctataa
//
last modified: Tue May 31 10:56 2022