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LOCUS GU191381 2604 bp RNA linear VRL 09-FEB-2010
DEFINITION HIV-1 isolate 131-D1 clone 31 from Italy envelope glycoprotein
(env) gene, complete cds
ACCESSION GU191381
VERSION GU191381.1 GI:288189332
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 2604)
Show all sequences for reference 1
AUTHORS McNicholas,P., Wei,Y., Whitcomb,J., Greaves,W., Black,T.A.,
Tremblay,C.L. and Strizki,J.M.
TITLE Characterization of emergent HIV resistance in treatment-naive
subjects enrolled in a vicriviroc phase 2 trial.
JOURNAL J. Infect. Dis.. 201(10); 1470-80 (2010)
PUBMED 20373959
REFERENCE 2 (bases 1 to 2604)
Show all sequences for reference 2
AUTHORS McNicholas,P., Wei,Y., Whitcomb,J., Greaves,W., Black,T.A.,
Tremblay,C.L. and Strizki,J.M.
TITLE Direct Submission
JOURNAL Submitted (11-NOV-2009) Biological Research-Virology, Schering
Plough Research Institute, 2015 Galloping Hill Road, K15/
E405/4945, Kenilworth, NJ 07033, USA
COMMENT Sampling date corrected by authors; it is Jan 11, 2005, not Nov
1,2005 [JM 8/2010].
FEATURES Location/Qualifiers
source 1..2604
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="131-D1"
/isolation_source="plasma sample of subject enrolled in a
clinical trial"
/host="Homo sapiens"
/db_xref="taxon:11676"
/clone="31"
/country="Italy"
/collection_date="01-Nov-2005"
gene 1..2604
/gene="env"
CDS 1..2604
/gene="env"
/codon_start="1"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="ADC43062.1"
/db_xref="GI:288189333"
/translation="MRVRVIRKSCQQFWKWGTLLLGILMICSAADQLWVTVYYGVPVW
REATTTLFCASDAKAYDTEKHNVWATHACVPTDPNPQEIVLENVTESFNMWKNDMVEQ
MHEDIISLWDESLKPCVKLTPLCITLHCTNLSQVDSCNNTNGNGTDIVSCNNSITIDR
GEIKVIKNCSFNITTNIKDKVKKEYAIFNKMDIVPIDEDNNTSNSNYRLISCNTSVIT
QACPKISFEPIPIHYCAPAGFAILKCNNKTFNGLGPCTNVSTVQCTHGIRPVVSTQLL
LNGSLAEKEVVIRSANFSNNAKVIIVQLNESVTINCTRPNNNTRRRINIQPGRAFFAT
GDIIGNIRQAYCNISGAQWNRTLNLIAKKLKEQFNNKSIIFRQSSGGDPEITMHSFNC
RGEFFYCNTTPLFNSTWNDTKQFTVSNSTEVITLPCRIKQIINMWQEVGKAMYAPPIR
GQLSCSSKITGLILTRDGGGNESRENETFRPAGGDMRDNWRSELYKYKVVKVEPLGIA
PTKAKRRVVQREKRAVTIGAMFLGFLGAAGSTMGAASMTLTVQARQLLSGIVQQQSNL
LRAIEAQQHMLQLTVWGIKQLRARVLAVERYLQDQQLLGIWGCSGKLICTTAVPWNAS
WSNKTQNEIWENMTWMQWEREIENYTGTIYNLLEESQNQQEKNEQELLELNKWASLWN
WFSISQWLWYIRIFIMIAGGLIGLRITFAVLSVVNRVRQGYSPLSFQTRLPTQRGPDR
PEEIEEEGGDRGRDRSIRLVDGFLALFWDDLRSLCLFSYHRLRDLLLIAARIVELLGR
RGWELLKLWWNLLQYWIQELKKSAVSLFNAIAIAVAEGTDRVIEAVQRACRAILHIPR
RIRQGLERALL"
BASE COUNT 916 a 448 c 601 g 639 t
ORIGIN
1 atgagagtga gggtgatcag gaagagttgt cagcaattct ggaaatgggg caccttgctc
61 cttggaatat tgatgatctg tagtgctgct gatcaactct gggtcacagt ttattatggg
121 gtacctgtgt ggagagaagc taccaccact ctattttgtg catcagatgc taaagcatat
181 gatacagaga agcacaatgt ttgggccaca catgcctgtg tacccacaga ccccaaccca
241 caagaaatag tattggaaaa tgttacagaa agttttaaca tgtggaaaaa tgacatggta
301 gaacagatgc atgaagatat aatcagttta tgggatgaaa gcctaaagcc atgtgtaaaa
361 ttaaccccac tctgtattac gttacattgc actaatttga gtcaagttga tagttgtaat
421 aataccaatg gtaatggtac agatatcgtt agttgtaata atagtatcac tattgatagg
481 ggggaaataa aagtaataaa aaactgctct ttcaatatca ccacaaacat aaaagataaa
541 gtgaaaaaag aatatgcaat ttttaataaa atggatatag taccaataga tgaggataat
601 aatacaagta attccaacta taggttgata agttgtaaca cctcagtcat tacacaggcc
661 tgtccaaaga tatcctttga gccaattccc atacattatt gtgccccggc tggttttgcg
721 attctaaagt gtaataataa gacattcaat ggattaggac catgtacaaa tgtcagtaca
781 gtacaatgta cacatggaat taggccagta gtatcaactc aactattgtt aaatggcagt
841 ctagcagaaa aagaggtagt aattagatct gcaaacttct cgaacaatgc taaagtcata
901 atagtacagc tgaatgaatc tgtaacaata aattgtacaa gacctaacaa caatacaaga
961 agaagaataa atatacaacc agggagagca ttttttgcaa caggagacat aataggaaat
1021 ataagacaag catattgtaa tattagtgga gcacaatgga acagaacttt aaatttgata
1081 gctaaaaaat taaaagaaca attcaacaac aagtcaataa tctttaggca atcctcagga
1141 ggggacccag aaattacaat gcacagtttt aattgtagag gggagttttt ctactgtaat
1201 acaaccccac tgtttaatag tacatggaat gacactaaac aattcactgt aagtaatagc
1261 actgaggtta tcacactccc atgcagaata aaacaaatta taaacatgtg gcaggaagta
1321 ggaaaagcaa tgtatgcccc tcctatcaga ggacaactta gctgctcatc aaagattaca
1381 gggctgatac taacaaggga tggtggtggt aacgagtcta gggaaaacga gacattcaga
1441 cctgcaggag gagatatgag ggacaattgg agaagtgaat tatataaata taaagtagta
1501 aaagttgaac cattaggaat agcacccacc aaggcaaagc gaagagtggt gcagagagaa
1561 aaaagagcag taacaatagg agctatgttc cttgggttct tgggagcagc aggaagcact
1621 atgggcgcag cgtcaatgac gctgacggta caggccaggc aattattgtc tggtatagtg
1681 caacagcaga gcaatttgct gagagctatt gaggcgcaac agcatatgtt gcaactcaca
1741 gtctggggca tcaaacagct ccgggcaaga gtcctggctg tggaaagata cctacaggac
1801 caacagctcc tagggatttg gggttgctct ggaaaactca tttgcaccac tgctgtgccc
1861 tggaatgcta gttggagtaa caaaactcaa aatgagattt gggaaaacat gacctggatg
1921 caatgggaaa gagaaattga aaattacaca ggcacaatat acaacttact tgaagaatcg
1981 caaaaccaac aagaaaagaa tgaacaagaa ttattggaat taaataagtg ggcaagtttg
2041 tggaattggt ttagcatatc acaatggctg tggtatataa gaatattcat aatgatagca
2101 ggaggcttga taggtttaag aataactttt gctgtactct ctgtagtgaa tagagttagg
2161 cagggatact caccattgtc atttcagacc cgcctcccaa cccagagggg acccgacagg
2221 cccgaagaaa tagaagaaga aggtggagac agaggcagag acagatcgat tcgattagtg
2281 gacggattct tagcactttt ctgggacgac ctgaggagcc tgtgcctttt cagctaccac
2341 cgcttgagag acttactctt gattgcagcg aggattgtgg aacttctggg acgcaggggg
2401 tgggaacttc tcaaactttg gtggaacctc ctgcaatatt ggatccagga actaaagaag
2461 agtgctgtta gcttgtttaa tgccatagca attgcagtag ctgaggggac agatagggtt
2521 atagaagcag tacagagggc ttgtagggct atcctccaca tacctagacg aataagacaa
2581 ggcttagaaa gggctttgct ataa
//
last modified: Tue May 31 10:56 2022