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LOCUS	    GU191381		    2604 bp    RNA     linear	VRL 09-FEB-2010
DEFINITION  HIV-1 isolate 131-D1 clone 31 from Italy envelope glycoprotein
	    (env) gene, complete cds
ACCESSION   GU191381
VERSION     GU191381.1 GI:288189332
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 2604)
            Show all sequences for reference 1
  AUTHORS   McNicholas,P., Wei,Y., Whitcomb,J., Greaves,W., Black,T.A.,
	    Tremblay,C.L. and Strizki,J.M.
  TITLE     Characterization of emergent HIV resistance in treatment-naive
	    subjects enrolled in a vicriviroc phase 2 trial.
  JOURNAL   J. Infect. Dis.. 201(10); 1470-80 (2010)
  PUBMED    20373959
REFERENCE   2 (bases 1 to 2604)
            Show all sequences for reference 2
  AUTHORS   McNicholas,P., Wei,Y., Whitcomb,J., Greaves,W., Black,T.A.,
	    Tremblay,C.L. and Strizki,J.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-NOV-2009) Biological Research-Virology, Schering
	    Plough Research Institute, 2015 Galloping Hill Road, K15/
	    E405/4945, Kenilworth, NJ 07033, USA
COMMENT     Sampling date corrected by authors; it is Jan 11, 2005, not Nov
	    1,2005 [JM 8/2010].
FEATURES             Location/Qualifiers
     source	     1..2604
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="131-D1"
		     /isolation_source="plasma sample of subject enrolled in a
		     clinical trial"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /clone="31"
		     /country="Italy"
		     /collection_date="01-Nov-2005"
     gene	     1..2604
		     /gene="env"
     CDS	     1..2604
		     /gene="env"
		     /codon_start="1"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="ADC43062.1"
		     /db_xref="GI:288189333"
		     /translation="MRVRVIRKSCQQFWKWGTLLLGILMICSAADQLWVTVYYGVPVW
		     REATTTLFCASDAKAYDTEKHNVWATHACVPTDPNPQEIVLENVTESFNMWKNDMVEQ
		     MHEDIISLWDESLKPCVKLTPLCITLHCTNLSQVDSCNNTNGNGTDIVSCNNSITIDR
		     GEIKVIKNCSFNITTNIKDKVKKEYAIFNKMDIVPIDEDNNTSNSNYRLISCNTSVIT
		     QACPKISFEPIPIHYCAPAGFAILKCNNKTFNGLGPCTNVSTVQCTHGIRPVVSTQLL
		     LNGSLAEKEVVIRSANFSNNAKVIIVQLNESVTINCTRPNNNTRRRINIQPGRAFFAT
		     GDIIGNIRQAYCNISGAQWNRTLNLIAKKLKEQFNNKSIIFRQSSGGDPEITMHSFNC
		     RGEFFYCNTTPLFNSTWNDTKQFTVSNSTEVITLPCRIKQIINMWQEVGKAMYAPPIR
		     GQLSCSSKITGLILTRDGGGNESRENETFRPAGGDMRDNWRSELYKYKVVKVEPLGIA
		     PTKAKRRVVQREKRAVTIGAMFLGFLGAAGSTMGAASMTLTVQARQLLSGIVQQQSNL
		     LRAIEAQQHMLQLTVWGIKQLRARVLAVERYLQDQQLLGIWGCSGKLICTTAVPWNAS
		     WSNKTQNEIWENMTWMQWEREIENYTGTIYNLLEESQNQQEKNEQELLELNKWASLWN
		     WFSISQWLWYIRIFIMIAGGLIGLRITFAVLSVVNRVRQGYSPLSFQTRLPTQRGPDR
		     PEEIEEEGGDRGRDRSIRLVDGFLALFWDDLRSLCLFSYHRLRDLLLIAARIVELLGR
		     RGWELLKLWWNLLQYWIQELKKSAVSLFNAIAIAVAEGTDRVIEAVQRACRAILHIPR
		     RIRQGLERALL"
BASE COUNT	916 a	 448 c	  601 g    639 t
ORIGIN
       1 atgagagtga gggtgatcag gaagagttgt cagcaattct ggaaatgggg caccttgctc 
      61 cttggaatat tgatgatctg tagtgctgct gatcaactct gggtcacagt ttattatggg 
     121 gtacctgtgt ggagagaagc taccaccact ctattttgtg catcagatgc taaagcatat 
     181 gatacagaga agcacaatgt ttgggccaca catgcctgtg tacccacaga ccccaaccca 
     241 caagaaatag tattggaaaa tgttacagaa agttttaaca tgtggaaaaa tgacatggta 
     301 gaacagatgc atgaagatat aatcagttta tgggatgaaa gcctaaagcc atgtgtaaaa 
     361 ttaaccccac tctgtattac gttacattgc actaatttga gtcaagttga tagttgtaat 
     421 aataccaatg gtaatggtac agatatcgtt agttgtaata atagtatcac tattgatagg 
     481 ggggaaataa aagtaataaa aaactgctct ttcaatatca ccacaaacat aaaagataaa 
     541 gtgaaaaaag aatatgcaat ttttaataaa atggatatag taccaataga tgaggataat 
     601 aatacaagta attccaacta taggttgata agttgtaaca cctcagtcat tacacaggcc 
     661 tgtccaaaga tatcctttga gccaattccc atacattatt gtgccccggc tggttttgcg 
     721 attctaaagt gtaataataa gacattcaat ggattaggac catgtacaaa tgtcagtaca 
     781 gtacaatgta cacatggaat taggccagta gtatcaactc aactattgtt aaatggcagt 
     841 ctagcagaaa aagaggtagt aattagatct gcaaacttct cgaacaatgc taaagtcata 
     901 atagtacagc tgaatgaatc tgtaacaata aattgtacaa gacctaacaa caatacaaga 
     961 agaagaataa atatacaacc agggagagca ttttttgcaa caggagacat aataggaaat 
    1021 ataagacaag catattgtaa tattagtgga gcacaatgga acagaacttt aaatttgata 
    1081 gctaaaaaat taaaagaaca attcaacaac aagtcaataa tctttaggca atcctcagga 
    1141 ggggacccag aaattacaat gcacagtttt aattgtagag gggagttttt ctactgtaat 
    1201 acaaccccac tgtttaatag tacatggaat gacactaaac aattcactgt aagtaatagc 
    1261 actgaggtta tcacactccc atgcagaata aaacaaatta taaacatgtg gcaggaagta 
    1321 ggaaaagcaa tgtatgcccc tcctatcaga ggacaactta gctgctcatc aaagattaca 
    1381 gggctgatac taacaaggga tggtggtggt aacgagtcta gggaaaacga gacattcaga 
    1441 cctgcaggag gagatatgag ggacaattgg agaagtgaat tatataaata taaagtagta 
    1501 aaagttgaac cattaggaat agcacccacc aaggcaaagc gaagagtggt gcagagagaa 
    1561 aaaagagcag taacaatagg agctatgttc cttgggttct tgggagcagc aggaagcact 
    1621 atgggcgcag cgtcaatgac gctgacggta caggccaggc aattattgtc tggtatagtg 
    1681 caacagcaga gcaatttgct gagagctatt gaggcgcaac agcatatgtt gcaactcaca 
    1741 gtctggggca tcaaacagct ccgggcaaga gtcctggctg tggaaagata cctacaggac 
    1801 caacagctcc tagggatttg gggttgctct ggaaaactca tttgcaccac tgctgtgccc 
    1861 tggaatgcta gttggagtaa caaaactcaa aatgagattt gggaaaacat gacctggatg 
    1921 caatgggaaa gagaaattga aaattacaca ggcacaatat acaacttact tgaagaatcg 
    1981 caaaaccaac aagaaaagaa tgaacaagaa ttattggaat taaataagtg ggcaagtttg 
    2041 tggaattggt ttagcatatc acaatggctg tggtatataa gaatattcat aatgatagca 
    2101 ggaggcttga taggtttaag aataactttt gctgtactct ctgtagtgaa tagagttagg 
    2161 cagggatact caccattgtc atttcagacc cgcctcccaa cccagagggg acccgacagg 
    2221 cccgaagaaa tagaagaaga aggtggagac agaggcagag acagatcgat tcgattagtg 
    2281 gacggattct tagcactttt ctgggacgac ctgaggagcc tgtgcctttt cagctaccac 
    2341 cgcttgagag acttactctt gattgcagcg aggattgtgg aacttctggg acgcaggggg 
    2401 tgggaacttc tcaaactttg gtggaacctc ctgcaatatt ggatccagga actaaagaag 
    2461 agtgctgtta gcttgtttaa tgccatagca attgcagtag ctgaggggac agatagggtt 
    2521 atagaagcag tacagagggc ttgtagggct atcctccaca tacctagacg aataagacaa 
    2581 ggcttagaaa gggctttgct ataa
//
last modified: Tue May 31 10:56 2022


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