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LOCUS GU191354 2568 bp RNA linear VRL 09-FEB-2010
DEFINITION HIV-1 isolate 008-D1 clone 16 from Germany envelope glycoprotein
(env) gene, complete cds
ACCESSION GU191354
VERSION GU191354.1 GI:288189278
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 2568)
Show all sequences for reference 1
AUTHORS McNicholas,P., Wei,Y., Whitcomb,J., Greaves,W., Black,T.A.,
Tremblay,C.L. and Strizki,J.M.
TITLE Characterization of emergent HIV resistance in treatment-naive
subjects enrolled in a vicriviroc phase 2 trial.
JOURNAL J. Infect. Dis.. 201(10); 1470-80 (2010)
PUBMED 20373959
REFERENCE 2 (bases 1 to 2568)
Show all sequences for reference 2
AUTHORS McNicholas,P., Wei,Y., Whitcomb,J., Greaves,W., Black,T.A.,
Tremblay,C.L. and Strizki,J.M.
TITLE Direct Submission
JOURNAL Submitted (11-NOV-2009) Biological Research-Virology, Schering
Plough Research Institute, 2015 Galloping Hill Road, K15/
E405/4945, Kenilworth, NJ 07033, USA
FEATURES Location/Qualifiers
source 1..2568
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="008-D1"
/isolation_source="plasma sample of subject enrolled in a
clinical trial"
/host="Homo sapiens"
/db_xref="taxon:11676"
/clone="16"
/country="Germany"
/collection_date="19-Nov-2004"
gene 1..2568
/gene="env"
CDS 1..2568
/gene="env"
/codon_start="1"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="ADC43035.1"
/db_xref="GI:288189279"
/translation="MKVKEIRMSWQPWRGGILLLGMLMLMSYNAAEESWVTVYYGVPV
WKEATTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEVVLENVTENFNMWKNDMVE
QMHEDIISLWDQSLKPCVKLTPLCVTLNCSDVNVTRTNNKTETSNNTSLRMEQGELKN
CSFNITTSIKKQVQKEYALFDRNDVVPIDSDNTSYMLISCNTSVITQTCPKVSFEPIP
IHFCAPAGFAILKCNDKKFNGTGPCRNVSTVQCTHGIRPVVSTQLLLNGSLAEEEVIL
SSENITNNAKTIIVHLNESIEINCTRPNNNTRKSINIGPGRAFFATGDIIGDIRKAYC
NISGAKWNNTLKQIATKLREQFGNNKTINFSQPNPGGDPEIVMHSFNCGGEFFYCNTT
KLFNSAWTWNDTTGSNNTEGMITLPCRIKQIINRWQEVGKAMYAPPISGLIRCSSNIT
GLLLTRDGGNNTNETEIFRPGGGEMRDNWRSELYKYKVVKIEPLGVAPTKAKRRVVQR
EKRAVTLGAMFLGFLGAAGSTMGAASLTLTVQARQLLSGIVQQQSNLLRAIEAQQHML
QLTVWGIKQLQARVLAVERYLQDQQLLGIWGCSGKLICTTTVPWNASWSNKSLANIWD
NMTWMEWEREIGNYTSLIYTLIEESQNQQEKNEQDLLALDKWASLWNWFNISNWLWYI
KIFIMIVGGLIGLRIVFTVLSIVNRVRQGYSPLSFQTHHPAPRGPDRPEGIEEEGGER
DKGRSEPLVTGFLAIIWVDLRSLCLFLYHRLRDLLLIATRIAELLGHRGWEALKYWWN
LLQYWGQELKSSAVSLLNATTIAVAEGTDRVIEVVQGTCRAIIHIPRRLRQSLEQRL"
BASE COUNT 890 a 443 c 611 g 624 t
ORIGIN
1 atgaaagtga aggagatcag gatgagttgg cagccctgga gagggggcat cttgctcctt
61 gggatgctga tgctgatgag ctataatgca gcagaggaat catgggtcac agtctattat
121 ggggtacctg tgtggaaaga agcaaccacc acattatttt gtgcatcaga tgctaaagcc
181 tatgacacag aggtacataa tgtttgggcc acacatgcct gtgtgcccac agaccctaac
241 ccacaagaag tagtattgga aaatgtgaca gaaaatttta atatgtggaa aaatgacatg
301 gtagaacaga tgcatgagga tataatcagc ttatgggatc aaagcctaaa gccgtgtgta
361 aaattaaccc cactctgtgt tactttaaat tgctctgatg taaatgtcac tagaaccaat
421 aataaaactg aaaccagtaa taatactagt ttaaggatgg aacaaggaga actaaaaaac
481 tgctctttca atatcaccac aagcataaaa aagcaggtgc agaaagaata tgcgcttttt
541 gatagaaatg atgtagtacc aatagattca gataatacaa gttatatgtt gataagttgt
601 aacacctcag tcattacaca gacctgtcca aaggtatcct ttgaaccaat tcccatacat
661 ttttgtgccc cagctggttt tgcgattcta aaatgtaatg ataagaaatt caatggaaca
721 ggaccatgta gaaatgtcag cacagtacag tgtacacatg gaattaggcc agtagtgtca
781 acacaactgc tgttaaatgg cagcctagca gaagaagagg taatacttag ctctgaaaat
841 atcacgaaca atgctaaaac cataatagta catctaaatg aatctataga aattaattgt
901 acaagaccta acaacaatac aaggaaaagt ataaatatag gaccagggag agcatttttt
961 gcaacaggag acataatagg agatataaga aaagcatatt gtaatattag tggagcaaaa
1021 tggaataaca ctttaaaaca gatagctaca aaattaagag aacaatttgg gaataataaa
1081 acaataaact ttagtcaacc aaacccagga ggggacccag aaattgtaat gcacagtttt
1141 aattgtggag gggagttttt ctactgtaat acaacaaagc tgtttaatag tgcttggact
1201 tggaatgata ctacagggtc aaataacact gaaggcatga tcacactccc atgcagaata
1261 aaacaaatta taaacaggtg gcaggaagta ggaaaagcaa tgtatgcccc tcccatcagt
1321 gggctaatta gatgttcatc aaatattaca gggctgttat taacaagaga tggtggtaat
1381 aatactaatg agactgagat cttcagacct ggaggaggag aaatgaggga caattggaga
1441 agtgaattat ataaatataa agtagtaaaa attgaaccat taggagtagc acccaccaag
1501 gcaaagagga gagtggtgca gagagaaaaa agagcagtga cgctgggagc tatgttcctt
1561 gggttcttgg gagcagcagg aagcactatg ggcgcagcgt cactgacgct gacggtacag
1621 gccagacaat tattgtctgg tatagtgcag cagcagagca atctgctgag ggctattgag
1681 gcgcagcagc atatgttgca actcacagtc tggggcatta agcagctcca ggcaagagtt
1741 cttgctgtgg aaagatacct acaggatcaa cagctcctag ggatttgggg ttgctctgga
1801 aaactcattt gcaccactac tgtgccttgg aatgctagtt ggagtaataa atctctggct
1861 aacatttggg ataacatgac ctggatggaa tgggagagag aaattggcaa ttacacaagc
1921 ttaatatata ccttaattga agaatcgcag aaccaacaag aaaagaatga acaagactta
1981 ctggcattgg ataagtgggc aagtttgtgg aattggttta acatatcaaa ttggctgtgg
2041 tatataaaaa tattcataat gatagtagga ggtttaatag gtttaagaat agtttttact
2101 gtactttcta tagtgaatag agttaggcag ggatactcac ccttgtcgtt ccagacccac
2161 cacccagctc cgaggggacc cgacaggccc gaaggaatcg aagaagaagg tggagagaga
2221 gacaaaggca gatccgaacc tttagtgact ggattcttag caatcatctg ggtcgaccta
2281 cggagcctgt gcctcttcct ctaccaccgc ttgagagact tactcttgat tgcaacgagg
2341 attgcggaac ttctgggaca cagggggtgg gaagccctca agtattggtg gaatctcctg
2401 cagtattggg gtcaggaact gaagagtagt gctgttagtt tgcttaatgc cacaactata
2461 gcagtagctg aggggacaga tagggttata gaagtagtac aaggaacctg tagagctatt
2521 atccacatac ctagaagact aagacagagc ttagagcaaa ggctataa
//
last modified: Tue May 31 10:56 2022