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LOCUS GU059282 1302 bp DNA linear VRL 07-MAR-2010
DEFINITION HIV-1 isolate 301V03000758 from Uganda pol protein (pol) gene,
partial cds
ACCESSION GU059282
VERSION GU059282.1 GI:290083367
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 1302)
Show all sequences for reference 1
AUTHORS Hudelson,S.E., McConnell,M.S., Bagenda,D., Piwowar-Manning,E.,
Parsons,T.L., Nolan,M.L., Bakaki,P.M., Thigpen,M.C., Mubiru,M.,
Fowler,M.G. and Eshleman,S.H.
TITLE Emergence and persistence of nevirapine resistance in breast milk
after single-dose nevirapine administration.
JOURNAL AIDS. 24(4); 557-61 (2010)
PUBMED 20057308
REFERENCE 2 (bases 1 to 1302)
Show all sequences for reference 2
AUTHORS Hudelson,S.E., McConnell,M.S., Bagenda,D., Piwowar-Manning,E.,
Parsons,T.L., Nolan,M.L., Bakaki,P.M., Thigpen,M.C., Mubiru,M.,
Fowler,M.G. and Eshleman,S.H.
TITLE Direct Submission
JOURNAL Submitted (02-OCT-2009) Pathology, The Johns Hopkins Medical
Institutions, 720 Rutland Ave., Ross Bldg. 646, Baltimore, MD
21050, USA
FEATURES Location/Qualifiers
source 1..1302
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="301V03000758"
/isolation_source="postpartum plasma"
/host="Homo sapiens"
/db_xref="taxon:11676"
/country="Uganda"
/collection_date="15-Dec-2003"
gene <1..>1302
/gene="pol"
CDS <1..>1302
/gene="pol"
/codon_start="1"
/transl_table="1"
/product="pol protein"
/protein_id="ADD23015.1"
/db_xref="GI:290083368"
/translation="PQITLWQRPLVTVKIGGQLKEALLDTGADDTVFEEMNLQGKWKP
KMIGGIGGFIKVRQYDQVSVEICGHKAVGTVLVGPTPVNIIGRNLLTQIGCTLNFPIS
PIETVPVKLKPGMDGPKVKQWPLTEEKIKALKEICTEMEKERKISKIGPENPYNTPIF
AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKXKSVTVLDVGDAYFSVP
LYEDFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPE
IVIYQYMDDLYVXSDLEIGQHRRKIEELREHLLKWGLTTPDKKHQKEPPFLWMGYELH
PDKWTVQPIQLPEKESWTVNDIQKLVGKLNWASQIYPGIKVRQLCKCIXGTKALTEVV
PLTEEAELELAENREILKEPVHGVYYDPSKDLVAEIQKQGQD"
BASE COUNT 522 a 214 c 271 g 290 t 5 other
ORIGIN
1 cctcagatca ctctttggca acgacccctt gtcacagtaa aaataggggg tcagctaaag
61 gaagctctat tagatacagg agcagatgat acagtattcg aagaaatgaa tttgcaagga
121 aaatggaagc caaaaatgat agggggaatt ggaggcttta tcaaagtaag acagtatgat
181 caagtatctg tagaaatctg tgggcataaa gctgtaggta cagtattagt aggacccaca
241 cctgtcaaca taattggaag aaacctgttg actcagattg gctgtactyt aaattttcca
301 attagtccta ttgagactgt accagtaaaa ttaaagccag ggatggatgg cccaaaagtt
361 aagcaatggc cattgacaga agaaaaaata aaagcactaa aagaaatttg tacagaaatg
421 gaaaaggaaa gaaaaatttc aaaaattggg cctgaaaatc catacaacac tccaatattt
481 gccataaaga aaaaagacag tactaagtgg agaaaattag tagatttcag agaacttaat
541 aagagaactc aagacttctg ggaagttcaa ctaggaatac cacatcctgc agggctaaaa
601 aagaamaaat cagtaacagt actggatgtg ggtgatgcat atttctcagt tcccttatat
661 gaagacttta gaaagtatac tgcattcacc atacctagta caaataatga gacaccagga
721 attagatatc agtacaatgt gcttccacaa ggatggaaag gatcaccagc aatattccaa
781 agtagcatga caaaaatcct agaaccattt agaaagcaaa atccagaaat agttatctat
841 caatacatgg atgatttgta tgtagsatct gacttagaaa taggacagca tagaagaaaa
901 atagaggaat tgagagaaca cctcttaaag tggggactta ccacaccaga taaaaagcat
961 cagaaagaac ccccatttct ttggatgggt tatgaactcc atcctgataa atggacagta
1021 carcccatac aactgccaga aaaggaaagc tggactgtca atgatataca gaagttagtg
1081 ggaaaattaa attgggcaag tcagatttac ccaggaatta aagtaagaca attatgcaaa
1141 tgcattargg gaaccaaagc actgacagag gtagtaccat tgacagaaga ggcagaatta
1201 gaactggcag aaaacaggga aattctaaaa gaaccagtac atggagtgta ttatgaccca
1261 tcaaaagact tagtagcaga aatacagaaa caagggcaag at
//
last modified: Tue May 31 10:56 2022