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LOCUS	    GU059282		    1302 bp    DNA     linear	VRL 07-MAR-2010
DEFINITION  HIV-1 isolate 301V03000758 from Uganda pol protein (pol) gene,
	    partial cds
ACCESSION   GU059282
VERSION     GU059282.1 GI:290083367
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 1302)
            Show all sequences for reference 1
  AUTHORS   Hudelson,S.E., McConnell,M.S., Bagenda,D., Piwowar-Manning,E.,
	    Parsons,T.L., Nolan,M.L., Bakaki,P.M., Thigpen,M.C., Mubiru,M.,
	    Fowler,M.G. and Eshleman,S.H.
  TITLE     Emergence and persistence of nevirapine resistance in breast milk
	    after single-dose nevirapine administration.
  JOURNAL   AIDS. 24(4); 557-61 (2010)
  PUBMED    20057308
REFERENCE   2 (bases 1 to 1302)
            Show all sequences for reference 2
  AUTHORS   Hudelson,S.E., McConnell,M.S., Bagenda,D., Piwowar-Manning,E.,
	    Parsons,T.L., Nolan,M.L., Bakaki,P.M., Thigpen,M.C., Mubiru,M.,
	    Fowler,M.G. and Eshleman,S.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-OCT-2009) Pathology, The Johns Hopkins Medical
	    Institutions, 720 Rutland Ave., Ross Bldg. 646, Baltimore, MD
	    21050, USA
FEATURES             Location/Qualifiers
     source	     1..1302
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="301V03000758"
		     /isolation_source="postpartum plasma"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="Uganda"
		     /collection_date="15-Dec-2003"
     gene	     <1..>1302
		     /gene="pol"
     CDS	     <1..>1302
		     /gene="pol"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="ADD23015.1"
		     /db_xref="GI:290083368"
		     /translation="PQITLWQRPLVTVKIGGQLKEALLDTGADDTVFEEMNLQGKWKP
		     KMIGGIGGFIKVRQYDQVSVEICGHKAVGTVLVGPTPVNIIGRNLLTQIGCTLNFPIS
		     PIETVPVKLKPGMDGPKVKQWPLTEEKIKALKEICTEMEKERKISKIGPENPYNTPIF
		     AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKXKSVTVLDVGDAYFSVP
		     LYEDFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPE
		     IVIYQYMDDLYVXSDLEIGQHRRKIEELREHLLKWGLTTPDKKHQKEPPFLWMGYELH
		     PDKWTVQPIQLPEKESWTVNDIQKLVGKLNWASQIYPGIKVRQLCKCIXGTKALTEVV
		     PLTEEAELELAENREILKEPVHGVYYDPSKDLVAEIQKQGQD"
BASE COUNT	522 a	 214 c	  271 g    290 t      5 other
ORIGIN
       1 cctcagatca ctctttggca acgacccctt gtcacagtaa aaataggggg tcagctaaag 
      61 gaagctctat tagatacagg agcagatgat acagtattcg aagaaatgaa tttgcaagga 
     121 aaatggaagc caaaaatgat agggggaatt ggaggcttta tcaaagtaag acagtatgat 
     181 caagtatctg tagaaatctg tgggcataaa gctgtaggta cagtattagt aggacccaca 
     241 cctgtcaaca taattggaag aaacctgttg actcagattg gctgtactyt aaattttcca 
     301 attagtccta ttgagactgt accagtaaaa ttaaagccag ggatggatgg cccaaaagtt 
     361 aagcaatggc cattgacaga agaaaaaata aaagcactaa aagaaatttg tacagaaatg 
     421 gaaaaggaaa gaaaaatttc aaaaattggg cctgaaaatc catacaacac tccaatattt 
     481 gccataaaga aaaaagacag tactaagtgg agaaaattag tagatttcag agaacttaat 
     541 aagagaactc aagacttctg ggaagttcaa ctaggaatac cacatcctgc agggctaaaa 
     601 aagaamaaat cagtaacagt actggatgtg ggtgatgcat atttctcagt tcccttatat 
     661 gaagacttta gaaagtatac tgcattcacc atacctagta caaataatga gacaccagga 
     721 attagatatc agtacaatgt gcttccacaa ggatggaaag gatcaccagc aatattccaa 
     781 agtagcatga caaaaatcct agaaccattt agaaagcaaa atccagaaat agttatctat 
     841 caatacatgg atgatttgta tgtagsatct gacttagaaa taggacagca tagaagaaaa 
     901 atagaggaat tgagagaaca cctcttaaag tggggactta ccacaccaga taaaaagcat 
     961 cagaaagaac ccccatttct ttggatgggt tatgaactcc atcctgataa atggacagta 
    1021 carcccatac aactgccaga aaaggaaagc tggactgtca atgatataca gaagttagtg 
    1081 ggaaaattaa attgggcaag tcagatttac ccaggaatta aagtaagaca attatgcaaa 
    1141 tgcattargg gaaccaaagc actgacagag gtagtaccat tgacagaaga ggcagaatta 
    1201 gaactggcag aaaacaggga aattctaaaa gaaccagtac atggagtgta ttatgaccca 
    1261 tcaaaagact tagtagcaga aatacagaaa caagggcaag at
//
last modified: Tue May 31 10:56 2022


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