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LOCUS	    GQ485393		    2559 bp    DNA     linear	VRL 22-SEP-2009
DEFINITION  HIV-1 clone Z185FPL10JUL04ENV4.1 from Zambia envelope glycoprotein
	    (env) gene, complete cds
ACCESSION   GQ485393
VERSION     GQ485393.1 GI:258643160
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 2559)
            Show all sequences for reference 1
  AUTHORS   Rong,R., Li,B., Lynch,R.M., Haaland,R.E., Murphy,M.K., Mulenga,J.,
	    Allen,S.A., Pinter,A., Shaw,G.M., Hunter,E., Robinson,J.E.,
	    Gnanakaran,S. and Derdeyn,C.A.
  TITLE     Escape from autologous neutralizing antibodies in acute/early
	    subtype C HIV-1 infection requires multiple pathways
  JOURNAL   PLoS Pathog. 5 (9), E1000594 (2009)
  PUBMED    19763269
REFERENCE   2 (bases 1 to 2559)
            Show all sequences for reference 2
  AUTHORS   Rong,R., Li,B., Lynch,R.M., Haaland,R.E., Murphy,M.K., Mulenga,J.,
	    Allen,S.A., Pinter,A., Shaw,G.M., Hunter,E., Robinson,J.E.,
	    Gnanakaran,S. and Derdeyn,C.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-AUG-2009) Pathology and Laboratory Medicine, Emory
	    University, 954 Gatewood Rd, Atlanta, GA 30329, USA
FEATURES             Location/Qualifiers
     source	     1..2559
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolation_source="plasma"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /clone="Z185FPL10JUL04ENV4.1"
		     /country="Zambia"
		     /collection_date="10-Jul-2004"
     gene	     1..2559
		     /gene="env"
     CDS	     1..2559
		     /gene="env"
		     /codon_start="1"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="ACV86548.1"
		     /db_xref="GI:258643161"
		     /translation="MRVMETSRNCQPWWIWGILGFWMLMICNAEEKLWVTVYYGVPVW
		     KEAKAPLFCASDAKAYEREVHNVWATHACVPTDPNPQEMILKNVTENFNMWKNDMVDQ
		     MNEDIISLWDQSLKPCVKLTPLCVTLNCSNFNSTANHTESTNNTSADLKQEIKNCSFY
		     TTTEIQDKKKTEHALFYKLDIVSLNGNEDGNENSTQYRLINCNTSAVTQACPKVSFDP
		     IPIHYCAPAGYAILKCNNNTFNGTGPCNNVSTVQCTHGIKPVVSTQLLLNGSLAEKEI
		     IIRSENLTDSVKTIIVQFNKSVEIVCVRPNNNTRKSVRIGPGQTFYATGDIIGDIRQA
		     HCNISAQPWNDTLQEVGKKLKEQFPNKTIKFAPSSGGDLEITTHSFNCRGEFFYCNTS
		     QLFNGTYMANSTNSNLNGTITLPCRIKQIINLWQKVGRAVYAPPIAGNITCKSNITGL
		     LLTHDGSNDSTVIFRPGGGDMRDNWRSELYKYKVVEIRPLGVAPTEAKRRVVEREKRA
		     VGIGAVFFGFLGAAGSTMGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQHMLQLTV
		     WGIKQLQTRVLAIERYLKDQQLLGLWGCSGKLICTTNVPWNHSWSHKTRDEIWENMTW
		     MQWDREINNYTGTIYRLLEDSQNQQEKNERDLLALDSWNNLWSWFDISRWLWYIKIFI
		     MIVGGLIGLRIIFAVLSVVNRVRQGYSPLSFQTLIPNPRGPDRPRGIEEEGGEQDRDR
		     SVRLVNGFLAIVWDDLRSLCLFSYHQLRDFILIVARAVELLGRRGWEALKYLGSLVQY
		     WGLELKKSAISLLDTIAITVAEGTDRIIELTQRIWRAILNIPRRIRQGFEAALL"
BASE COUNT	901 a	 432 c	  596 g    630 t
ORIGIN
       1 atgagagtga tggagacatc gaggaattgt caaccatggt ggatatgggg catcttaggc 
      61 ttttggatgt taatgatttg taatgcagag gagaaattgt gggtcacagt ctattatggg 
     121 gtacctgtgt ggaaagaggc aaaagctcct ctattttgtg catcagatgc taaagcctat 
     181 gagagagaag tacataatgt ttgggctaca catgcctgtg tacccacaga ccccaaccca 
     241 caagaaatga ttttgaaaaa tgtaacagaa aattttaata tgtggaaaaa tgacatggtg 
     301 gatcagatga atgaggatat aatcagttta tgggatcaaa gcttaaagcc atgtgtaaag 
     361 ttgaccccac tctgtgtcac tttaaactgt agtaacttca atagtactgc taaccacact 
     421 gagagtacta ataatacctc tgctgatctt aagcaagaaa taaaaaattg ctctttctat 
     481 acaaccacag aaatacaaga taagaagaag actgaacatg cactttttta taaacttgat 
     541 atagtatcac ttaatgggaa tgaagatggg aatgaaaatt ctactcaata tagattaata 
     601 aattgtaata cctcagccgt aacacaagcc tgtccaaagg tctcttttga cccaattcct 
     661 atacactatt gcgctccagc tggttatgcg attctgaagt gtaataacaa tacattcaat 
     721 ggaacaggac catgcaacaa cgtcagcaca gtacaatgta cacatggaat taaaccagtg 
     781 gtatcaactc aactactgtt gaatggtagt ctagcagaaa aggagataat aattagatct 
     841 gaaaatctga cagacagtgt caaaacaata atagtacagt ttaacaaatc tgtagaaatt 
     901 gtgtgtgtaa ggcccaacaa taatacaagg aaaagtgtga gaataggacc aggacaaaca 
     961 ttctatgcaa caggagacat aataggagat ataagacaag cacattgtaa cattagtgca 
    1021 cagccatgga atgacacttt gcaagaggta ggtaaaaaat taaaagaaca attccctaat 
    1081 aaaaccataa agtttgcacc atcctcagga ggggacctag aaattacaac acatagcttt 
    1141 aattgtagag gagaattttt ctattgcaat acatcacaat tgtttaatgg cacatacatg 
    1201 gctaatagca caaacagtaa tttaaatgga accatcacac tcccatgcag gataaaacaa 
    1261 attataaact tgtggcagaa ggtaggacga gcagtgtatg ccccccccat tgcaggaaac 
    1321 ataacatgta aatcaaatat cacaggacta ctattgacac atgatgggag caatgattca 
    1381 acagtaatat tcagacctgg aggaggagat atgagggaca attggagaag tgaattatat 
    1441 aaatataaag tagtagaaat taggccatta ggagtagcac caactgaggc aaaaaggaga 
    1501 gtggtggaga gagaaaaaag agcagtggga ataggagctg tgttctttgg gttcttggga 
    1561 gctgcaggaa gcactatggg cgcagcatca ataacgctga cggtacaggc cagacaattg 
    1621 ttgtctggta tagtgcaaca gcaaagtaat ttgctgaggg ctatagaggc gcaacagcat 
    1681 atgttgcaac tcacggtctg gggcattaag cagctccaga caagagtcct ggctatagaa 
    1741 agatacctaa aggatcaaca gctcctaggg ctttggggct gctctggaaa actcatctgc 
    1801 accactaatg tgccttggaa ccatagttgg agtcataaaa ctagagatga aatttgggag 
    1861 aacatgactt ggatgcagtg ggatagagaa attaataatt acacaggcac aatatacagg 
    1921 ttgcttgaag actcgcaaaa ccagcaggag aaaaatgaaa gagatttact agcattggac 
    1981 agttggaaca atctgtggag ttggtttgac atatcaagat ggctgtggta tataaagata 
    2041 tttataatga tagtaggagg cttgataggg ttaagaataa tttttgcagt gctctctgta 
    2101 gtgaatagag ttaggcaggg atactcacct ttgtcatttc agacccttat cccaaacccg 
    2161 aggggacccg acaggcccag aggaatcgaa gaagaaggtg gagagcaaga cagagacaga 
    2221 tccgtgcgat tagtgaacgg attcttagcg attgtctggg acgatctgcg gagcctgtgc 
    2281 ctcttcagct accaccaatt gagagacttc atattgattg tggcgagagc agtggaactt 
    2341 ctgggacgca gagggtggga agcccttaag tatttgggaa gtcttgtgca gtattggggt 
    2401 ctagagctaa aaaagagtgc tattagtctg cttgatacca tagcaataac agtagctgaa 
    2461 ggaacagata gaattataga attaacacaa agaatttgga gagctatcct taacatacct 
    2521 agaagaataa gacagggctt tgaagcagca ttgctataa
//
last modified: Tue May 31 10:56 2022


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