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LOCUS	    GQ462101		    1497 bp    RNA     linear	VRL 07-NOV-2009
DEFINITION  HIV-1 isolate 70299 from United Kingdom pol protein (pol) gene,
	    partial cds
ACCESSION   GQ462101
VERSION     GQ462101.1 GI:262287930
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 1497)
            Show all sequences for reference 1
  AUTHORS   Hughes,G.J., Fearnhill,E., Dunn,D., Lycett,S.J., Rambaut,A. and
	    Leigh Brown,A.J.
  CONSRTM   UK HIV Drug Resistance Collaboration
  TITLE     Molecular phylodynamics of the heterosexual HIV epidemic in the
	    United Kingdom
  JOURNAL   PLoS Pathog. 5 (9), E1000590 (2009)
  PUBMED    19779560
REFERENCE   2 (bases 1 to 1497)
            Show all sequences for reference 2
  AUTHORS   Hughes,G.J., Fearnhill,E., Dunn,D., Lycett,S.J., Rambaut,A. and
	    Leigh Brown,A.J.
  CONSRTM   UK HIV Drug Resistance Collaboration
  TITLE     Direct Submission
  JOURNAL   Submitted (07-AUG-2009) Institute for Evolutionary Biology,
	    University of Edinburgh, West Mains Road, Edinburgh EH9 3JT,
	    Scotland
FEATURES             Location/Qualifiers
     source	     1..1497
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="70299"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="United Kingdom"
     gene	     <1..>1497
		     /gene="pol"
     CDS	     <1..>1497
		     /gene="pol"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="ACY41752.1"
		     /db_xref="GI:262287931"
		     /translation="PQITLWQRPLVSIKVGGQIKEALLDTGADDTVLEEINLPGKWKP
		     KMIGGIGGFIKVXQYDQIVIXICGKKAIGTVLVGPTPVNIIGRNMLTQLGCTLNFPIS
		     PIETVPVKLKPGMDGPKVKQWPLTEEKIKALTAICEEMEKEGKISKIGPENPYNTPVF
		     AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPSGLKKKKSVTVLDVGDAYFSVP
		     LDESFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQCSMTKILEPFRAQNPE
		     IVIYQYMDDLYVGSDLEIGQHRAKIEELREHLLRWGFTTPDKKHQKEPPFLWMGYELH
		     PDKWTVQPIQLPDKESWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGAKALTDVV
		     PLTEEAELELAENREILKEPVHGVYYDPSKDLIAEIQKQGHDQWTYQIYQEPFKNLKT
		     GKYAKRRTAHTNDVKKLTEVVQKVAMESIVIWGKTPKFRLPIQKETWEA"
BASE COUNT	592 a	 244 c	  326 g    329 t      6 other
ORIGIN
       1 cctcaaatca ctctttggca gcgacccctt gtctcaataa aagtaggggg ccagataaag 
      61 gaggctctct tagatacagg agcagatgat acagtattag aagaaataaa tttgccagga 
     121 aaatggaaac caaaaatgat aggaggaatt ggaggtttta tcaaagtaar acagtatgat 
     181 caaatagtta tagamatttg tgggaaaaag gctataggta cagtactagt agggcccaca 
     241 cctgtcaaca taattggaag aaatatgttg actcaacttg gatgtacact aaattttcca 
     301 attagtccca ttgaaactgt accagtaaaa ttgaagccag gaatggatgg cccaaaagtg 
     361 aaacaatggc cattgacaga agaaaaaata aaagcactaa cagcaatttg tgaagaaatg 
     421 gagaaggaag gaaaaatttc aaaaattggg cctgaaaatc catataacac tccagtattt 
     481 gccataaaaa agaaggacag taccaagtgg agaaaattag twgatttcag ggaactcaat 
     541 aaaagaactc aagayttttg ggaagttcaa ttaggaatac cacacccatc agggttaaaa 
     601 aagaaaaaat cagtgacagt actggatgtg ggggatgcat atttctcagt tcctttagat 
     661 gaaagtttca gaaaatatac tgcattcacm atacctagta caaacaatga aacaccaggg 
     721 attagatatc aatacaatgt gcttccacag ggatggaaag gatcaccagc aatattccag 
     781 tgtagcatga caaaaatytt agagcccttt agggcacaaa acccagaaat agttatctat 
     841 caatatatgg atgacttgta tgtaggatct gatttagaaa tagggcaaca tagagcaaaa 
     901 atagaggagt taagagaaca cctattgaga tggggattta ccacaccaga caagaaacat 
     961 cagaaagaac ccccatttct ttggatgggg tatgaactcc atcctgataa gtggacagta 
    1021 cagcctatac agttaccaga caaggagagc tggactgtca atgatataca gaaattagtg 
    1081 gggaaattaa attgggcaag tcagatttac ccagggatta aagtaaagca actgtgtaaa 
    1141 ctccttaggg gagccaaagc actaacagat gtagtaccac tgactgaaga agcagaatta 
    1201 gaattggcag agaacaggga aattctaaaa gaaccagtac atggggtata ttatgaccca 
    1261 tcaaaagact taatagctga aatacagaaa caggggcatg accagtggac atatcaaatt 
    1321 taccaagaac cattcaaaaa tctgaaaaca gggaaatatg caaaaaggag gactgcccac 
    1381 actaatgatg taaagaagct aacagaggta gtgcaaaagg tagccatgga aagcatagta 
    1441 atatggggaa aaactcctaa atttaggtta cccattcaaa aggaaacatg ggaggcg
//
last modified: Tue May 31 10:56 2022


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