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LOCUS GQ462086 1110 bp RNA linear VRL 07-NOV-2009
DEFINITION HIV-1 isolate 69495 from United Kingdom nonfunctional pol protein
(pol) gene, partial sequence
ACCESSION GQ462086
VERSION GQ462086.1 GI:262287901
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 1110)
Show all sequences for reference 1
AUTHORS Hughes,G.J., Fearnhill,E., Dunn,D., Lycett,S.J., Rambaut,A. and
Leigh Brown,A.J.
CONSRTM UK HIV Drug Resistance Collaboration
TITLE Molecular phylodynamics of the heterosexual HIV epidemic in the
United Kingdom
JOURNAL PLoS Pathog. 5 (9), E1000590 (2009)
PUBMED 19779560
REFERENCE 2 (bases 1 to 1110)
Show all sequences for reference 2
AUTHORS Hughes,G.J., Fearnhill,E., Dunn,D., Lycett,S.J., Rambaut,A. and
Leigh Brown,A.J.
CONSRTM UK HIV Drug Resistance Collaboration
TITLE Direct Submission
JOURNAL Submitted (07-AUG-2009) Institute for Evolutionary Biology,
University of Edinburgh, West Mains Road, Edinburgh EH9 3JT,
Scotland
FEATURES Location/Qualifiers
source 1..1110
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="69495"
/host="Homo sapiens"
/db_xref="taxon:11676"
/country="United Kingdom"
gene <1..>1110
/gene="pol"
misc_feature <1..>1110
/gene="pol"
/note="nonfunctional pol protein due to mutation"
BASE COUNT 421 a 198 c 242 g 244 t 5 other
ORIGIN
1 acagcccacc agcagagagc ttcggttcga ggagacaacc ccagctccga cgaagcagga
61 gccgaaagac agggaagcct taacctccct cagatcactc tttggcagcg accccttgtc
121 tcaataaaag tagggggcca gacaaaagag gctctcttag acacaggagc agatgataca
181 gtattagaag aaataamttt gccaggaaaa tggaaaccaa aaatgatagg aggaatggga
241 ggttttatca aagtaagaca atatgatcaa ataccyatag aaatttgtgg aaaaaaggct
301 ataggtacag tgttagtggg acccacacct gtcaacataa ttggaagaaa tctgttgact
361 cagcttggat gyacactaaa ttttccaatc agtcccattg aaactgtacc agtaaaatta
421 aagccaggaa tggatggccc aaaggttaaa caatggccat tgacagaaga gaaaataaaa
481 gcattaacag aaatttgtga tgaaatggag aaggaaggaa aaattacaaa aattgggcct
541 gataatccat ataacactcc aatatttgcc attaaaaaga aggacagtac taagtggaga
601 aaattagtag atttcaggga actcaataaa agaactcaag atttttggga agttcaatta
661 ggaataccac acccagcagg gttaaaaaag aaaaaatcag tgacagtact ggatgtgggg
721 gatgcatatt tttcagttcc tttrtatgaa gacttcagga aatatactgc attcaccata
781 cctagtagaa acaatgaaac accagggatt agrtatcaat ataatgtgct tccacaggga
841 tggaaaggat caccagcaat attccaagct agtatgacca aaatcttaga gccctttaga
901 gcacaaaacc cagaaatagt catctatcaa tatatggatg acttgtatgt aggatctgac
961 ttagaaatag ggcaacatag ggcaaaaata gaggagttaa gaggacatct gttaaagtgg
1021 gggtttacca caccagacaa gaaacatcag aaagaacctc catttctttg gatggggtat
1081 gaactccacc ctgataaatg gacagtacag
//
last modified: Tue May 31 10:56 2022