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LOCUS	    GQ398828		    1259 bp    DNA     linear	VRL 29-SEP-2009
DEFINITION  HIV-1 isolate 000508723909344 from Portugal nonfunctional pol
	    protein (pol) gene, partial sequence
ACCESSION   GQ398828
VERSION     GQ398828.1 GI:259377641
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 1259)
            Show all sequences for reference 1
  AUTHORS   Vercauteren,J., Wensing,A.M.J., Van de Vijver,D.A.M.C., Albert,J.,
	    Balotta,C., Hamouda,O., Kucherer,C., Struck,D., Schmit,J.-C.,
	    Asjo,B., Bruckova,M., Camacho,R.J., Clotet,B., Coughlan,S.,
	    Grossman,Z., Horban,A., Korn,K., Kostrikis,L., Nielsen,C.,
	    Paraskevis,D., Poljak,M., Puchhammer-Stockl,E., Riva,C., Ruiz,L.,
	    Salminen,M., Schuurman,R., Sonnerborg,A., Stanekova,D.,
	    Stanojevic,M., Vandamme,A.-M. and Boucher,C.A.B.
  CONSRTM   SPREAD / EuropeHIVResistance
  TITLE     Transmission of drug-resistant HIV-1 is stabilizing in Europe.
  JOURNAL   J. Infect. Dis.. 200(10); 1503-8 (2009)
  PUBMED    19835478
REFERENCE   2 (bases 1 to 1259)
            Show all sequences for reference 2
  AUTHORS   Vercauteren,J., Wensing,A.M.J., Van de Vijver,D.A.M.C., Albert,J.,
	    Balotta,C., Hamouda,O., Kuecherer,C., Struck,D., Schmit,J.-C.,
	    Asjo,B., Bruckova,M., Camacho,R., Clotet,B., Coughlan,S.,
	    Grossman,Z., Horban,A., Korn,K., Kostrikis,L.G., Nielsen,C.,
	    Paraskevis,D., Poljak,M., Puchhammer-Stoeckl,E., Riva,C., Ruiz,L.,
	    Salminen,M., Schuurman,R., Soennerborg,A., Stanekova,D.,
	    Stanojevic,M., Vandamme,A.-M. and Boucher,C.A.
  CONSRTM   SPREAD / EuropeHIVResistance
  TITLE     Direct Submission
  JOURNAL   Submitted (15-JUL-2009) Rega Institute for Medical Research and
	    University Hospitals, Katholieke Universiteit Leuven, Leuven,
	    Belgium
FEATURES             Location/Qualifiers
     source	     1..1259
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="g8ur0oCoJ6vKeZq"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="Portugal"
		     /collection_date="2003"
		     /collected_by="R. Camacho, MD"
     gene	     <1..>1259
		     /gene="pol"
     misc_feature    <1..>1259
		     /gene="pol"
		     /note="nonfunctional pol protein due to mutation"
     misc_feature    <1..297
		     /gene="pol"
		     /note="protease"
     misc_feature    298..>1259
		     /gene="pol"
		     /note="reverse transcriptase"
BASE COUNT	488 a	 208 c	  268 g    291 t      4 other
ORIGIN
       1 cctcaaatca ctctttggca gcgacccata gtcacagtaa gaataggggg acagctaata 
      61 gaagccctgt tagacacagg agcagatgat acagtgttag aagatataaa cttaccagga 
     121 aaatggaaac caaaaatgat agggggaatt ggtggtttta tcaaagtaag acagtatgat 
     181 caaatactta tagaaatttg tggaaaaaag gctataggga cagtattagt aggacctaca 
     241 cctatcaaca taattgggag aaatatgttg actcagattg gttgtacctt aaatcttcca 
     301 attagcccta ttgaaactgt accagtaaaa ttaaagccag gaatggatgg tccaagggtt 
     361 aaacaatggc cattgacaga agaaaaaata aaagccttaa cagacatttg tacagaaatg 
     421 gaaaaggaag gaaaaatttc aaaaattgga cctgaaaatc catataacac tccaatattt 
     481 gccataaaga aaaaagacag tactaaatgg agaaaattgg tagattttag agagctcaat 
     541 aaaagaactc aagacttctg ggaggtccaa ttaggaatac ctcatccctc ggggttaaaa 
     601 aagaaaaaat cagtaacagt gctagatgta ggggatgcat acttttcagt gcccttagat 
     661 gaaagcttta gaaagtatac tgcattcact atacctagta caaataatga gacaccaggg 
     721 attagatatc agtacaatgt gcttccacag ggatggaaag gatcaccagc aatatttcaa 
     781 agtagcatga caaaaatctt agagcccttt agaatgaaga atccagacat agtgatctac 
     841 caatatatgg atgatttata tgtaggttct gacttagaaa tagggcagca tagagcaaaa 
     901 atagaggagt taagaaaaca tctgttaagc tgggggttta ccacaccaga taaaaagcat 
     961 cagaaagaac ctccattcct ttggatggga tatgagctcc atcctgataa atggacagta 
    1021 caacctatac agctgccaga caaagaaagc tggactgtca atgatataca aaagttagtg 
    1081 ggaaagctaa attgggcaag ccagatttat ccagggatta argtaaawcr actatgtaaa 
    1141 ctccttaggg gagccaaagc attaacagac atagtaccac taactgcaga agcagaattg 
    1201 gaattggcag agaacaggga gattctaaaa gaaccwgtac atggagtcta ttaggaccc
//
last modified: Tue May 31 10:56 2022


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