View NCBI entry Download GenBank file Graphics View Download GFF3 File
LOCUS GQ256450 427 bp RNA linear VRL 26-JUL-2009
DEFINITION HIV-1 clone 4.1-3 from USA envelope glycoprotein (env) gene,
partial cds
ACCESSION GQ256450
VERSION GQ256450.1 GI:254548390
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 427)
Show all sequences for reference 1
AUTHORS Brennan,T.P., Woods,J.O., Sedaghat,A.R., Siliciano,J.D.,
Siliciano,R.F. and Wilke,C.O.
TITLE Direct Submission
JOURNAL Submitted (09-JUN-2009) Department of Medicine, The Johns Hopkins
University School of Medicine, 733 North Broadway BRB 872,
Baltimore, MD 21205, USA
REFERENCE 2
Show all sequences for reference 2
AUTHORS Brennan,T.P., Woods,J.O., Sedaghat,A.R., Siliciano,J.D.,
Siliciano,R.F. and Wilke,C.O.
TITLE Analysis of human immunodeficiency virus type 1 viremia and
provirus in resting CD4+ T cells reveals a novel source of residual
viremia in patients on antiretroviral therapy
JOURNAL J. Virol. 83 (17), 8470-8481 (2009)
PUBMED 19535437
REFERENCE 3
Show all sequences for reference 3
AUTHORS Wang,Z., Gurule,E.E., Brennan,T.P., Gerold,J.M., Kwon,K.J.,
Hosmane,N.N., Kumar,M.R., Beg,S.A., Capoferri,A.A., Ray,S.C.,
Ho,Y.-C., Hill,A.L., Siliciano,J.D. and Siliciano,R.F.
TITLE Expanded cellular clones carrying replication-competent HIV-1
persist, wax, and wane.
JOURNAL Proc. Natl. Acad. Sci. U. S. A.. 115(11); E2575-E2584 (2018)
PUBMED 29483265
FEATURES Location/Qualifiers
source 1..427
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="182"
/host="Homo sapiens"
/db_xref="taxon:11676"
/clone="4.1-3"
/country="USA: Johns Hopkins Hospital, Baltimore,
Maryland"
/collection_date="Oct-2005"
gene <1..>427
/gene="env"
CDS <1..>427
/gene="env"
/note="C2-V4 region"
/codon_start="1"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="ACT67011.1"
/db_xref="GI:254548391"
/translation="QLNEPVEINCTRPNNNTRRSIHIGLGRRFYATRIIGDIRQAHCN
LSNKKWKNTLREIAKKLGEKYNKTIVFNGPSGGGPEIVMHTFNCGGEFFYCNATKLFN
STWNSSTWNDNNPGENVTITLPCRIKQIINMWQKVGKAMY"
BASE COUNT 176 a 59 c 89 g 103 t
ORIGIN
1 cagctgaacg aacctgtaga aattaattgt acaaggccca acaacaatac aagaaggagt
61 atacatatag gactggggag aagattttat gcaacaagaa taataggaga tataagacaa
121 gcacattgta accttagtaa taaaaaatgg aagaacactt taagagagat agctaaaaaa
181 ttaggagaaa agtataataa aaccatagtc tttaatggac cctcaggagg gggcccagaa
241 attgtaatgc acacttttaa ttgtggagga gaatttttct actgtaatgc aacaaagctg
301 tttaattcta cgtggaatag tagtacttgg aatgataata atcctgggga aaatgttact
361 atcacactcc catgcaggat aaaacaaatt ataaacatgt ggcagaaagt aggaaaagca
421 atgtatg
//
last modified: Tue May 31 10:56 2022