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LOCUS	    GQ252769		     402 bp    DNA     linear	VRL 12-AUG-2009
DEFINITION  HIV-1 isolate E27755B1 from Uganda envelope glycoprotein (env)
	    gene, partial cds
ACCESSION   GQ252769
VERSION     GQ252769.1 GI:255669903
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 402)
            Show all sequences for reference 1
  AUTHORS   Kiwanuka,N., Laeyendecker,O., Quinn,T.C., Wawer,M.J., Shepherd,J.,
	    Robb,M., Kigozi,G., Kagaayi,J., Serwadda,D., Makumbi,F.E.,
	    Reynolds,S.J. and Gray,R.H.
  TITLE     HIV-1 subtypes and differences in heterosexual HIV transmission
	    among HIV-discordant couples in Rakai, Uganda.
  JOURNAL   AIDS. 23(18); 2479-84 (2009)
  PUBMED    19841572
REFERENCE   2 (bases 1 to 402)
            Show all sequences for reference 2
  AUTHORS   Kiwanuka,N., Layendecker,O., Quinn,T.C., Wawer,M.J., Shepherd,J.,
	    Robb,M., Kigozi,G., Kagaayi,J., Serwadda,D., Makumbi,F.E.,
	    Reynolds,S.J. and Gray,R.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-JUN-2009) School of Public Health, Makerere
	    University, Kampala, Uganda
REFERENCE   3
            Show all sequences for reference 3
  AUTHORS   Gray,R.R., Tatem,A.J., Lamers,S., Hou,W., Laeyendecker,O.,
	    Serwadda,D., Sewankambo,N., Gray,R.H., Wawer,M., Quinn,T.C.,
	    Goodenow,M.M. and Salemi,M.
  TITLE     Spatial phylodynamics of HIV-1 epidemic emergence in east Africa.
  JOURNAL   AIDS. 23(14); F9-F17 (2009)
  PUBMED    19644346
REFERENCE   4
            Show all sequences for reference 4
  AUTHORS   Collinson-Streng,A.N., Redd,A.D., Sewankambo,N.K., Serwadda,D.,
	    Rezapour,M., Lamers,S.L., Gray,R.H., Wawer,M.J., Quinn,T.C. and
	    Laeyendecker,O.
  TITLE     Geographic HIV type 1 subtype distribution in Rakai district,
	    Uganda.
  JOURNAL   AIDS Res. Hum. Retroviruses. 25(10); 1045-8 (2009)
  PUBMED    19803713
FEATURES             Location/Qualifiers
     source	     1..402
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="E27755B1"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="Uganda:Kyotera"
		     /collection_date="05-Feb-1997"
		     /note="subtype: A1"
     gene	     <1..>402
		     /gene="env"
     CDS	     <1..>402
		     /gene="env"
		     /note="gp41"
		     /codon_start="1"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="ACU26223.1"
		     /db_xref="GI:255669904"
		     /translation="LSGIVQQQSNLLRAIEAQQHLLKLTVWGIKQLQARVLAVERYLK
		     DQQLLGIWGCSGKLICTTSVPWNSSWSNKSLNEIWNNMTWLQWEKEISNYTNKIYDLL
		     EESQNQQEKNEQDLLALDKWANLWNWFDISNW"
BASE COUNT	136 a	  73 c	   99 g     94 t
ORIGIN
       1 ttgtctggca tagtgcaaca gcaaagcaat ttgctgaggg ctatagaggc tcaacaacat 
      61 ctgttgaaac tcacggtctg gggcattaaa cagctccagg caagagtcct ggctgtggaa 
     121 agatacctaa aggatcaaca gctcctagga atttggggct gctctggaaa actcatatgc 
     181 accactagtg tgccctggaa ctctagttgg agtaataaat ctctgaatga gatatggaat 
     241 aatatgacct ggctgcagtg ggagaaagag attagtaatt acacaaacaa aatatatgac 
     301 ctacttgaag aatcgcagaa ccagcaggaa aagaatgaac aagacttatt agcattggac 
     361 aagtgggcaa atctgtggaa ttggtttgac atatcaaact gg
//
last modified: Tue May 31 10:56 2022


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