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LOCUS GQ228282 288 bp RNA linear VRL 15-JUL-2009
DEFINITION HIV-1 isolate patient 8295 from Malawi protease (pol) gene, partial
cds
ACCESSION GQ228282
VERSION GQ228282.1 GI:253720939
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 288)
Show all sequences for reference 1
AUTHORS Hosseinipour,M.C., van Oosterhout,J.J., Weigel,R., Phiri,S.,
Kamwendo,D., Parkin,N., Fiscus,S.A., Nelson,J.A., Eron,J.J. and
Kumwenda,J.
TITLE The public health approach to identify antiretroviral therapy
failure: high-level nucleoside reverse transcriptase inhibitor
resistance among Malawians failing first-line antiretroviral
therapy
JOURNAL AIDS 23 (9), 1127-1134 (2009)
PUBMED 19417582
REFERENCE 2 (bases 1 to 288)
Show all sequences for reference 2
AUTHORS Nelson,J.A.E.
TITLE Direct Submission
JOURNAL Submitted (02-JUN-2009) Microbiology and Immunology, University of
North Carolina at Chapel Hill, CB 7290, Chapel Hill, NC 27599, USA
FEATURES Location/Qualifiers
source 1..288
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="patient 8295"
/isolation_source="plasma"
/host="Homo sapiens"
/db_xref="taxon:11676"
/country="Malawi"
/collection_date="22-Aug-2006"
/note="subtype: C"
gene <1..>288
/gene="pol"
CDS <1..>288
/gene="pol"
/codon_start="1"
/transl_table="1"
/product="protease"
/protein_id="ACT33836.1"
/db_xref="GI:253720940"
/translation="TLWQRPLVSIKVGGQIKEALLDTGADDTVLEEINLPGKWKPKMI
GGIGGFIKVRQYDEIPIEICGKKAIGTVLVGPTPVNIIGRNLLTQLGCTLNF"
BASE COUNT 109 a 42 c 64 g 71 t 2 other
ORIGIN
1 actctttggc agcgacccct tgtctcaata aaagtagggg gccaaataaa ggaggctcta
61 ttagacacag gagcagatga tacagtatta gaagaaataa atttgccagg aaaatggaaa
121 ccraaaatga taggaggaat tggaggtttt atcaaagtaa gacaatatga tgaaatacct
181 atagaaattt gtggaaaaaa ggctataggt acagtattag tagggcctac acctgtcaac
241 ataattggaa gaaatctgtt gactcarctt ggatgcacac taaatttt
//
last modified: Tue May 31 10:56 2022