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LOCUS	    GQ228261		     288 bp    RNA     linear	VRL 15-JUL-2009
DEFINITION  HIV-1 isolate patient 9359 from Malawi protease (pol) gene, partial
	    cds
ACCESSION   GQ228261
VERSION     GQ228261.1 GI:253720897
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 288)
            Show all sequences for reference 1
  AUTHORS   Hosseinipour,M.C., van Oosterhout,J.J., Weigel,R., Phiri,S.,
	    Kamwendo,D., Parkin,N., Fiscus,S.A., Nelson,J.A., Eron,J.J. and
	    Kumwenda,J.
  TITLE     The public health approach to identify antiretroviral therapy
	    failure: high-level nucleoside reverse transcriptase inhibitor
	    resistance among Malawians failing first-line antiretroviral
	    therapy
  JOURNAL   AIDS 23 (9), 1127-1134 (2009)
  PUBMED    19417582
REFERENCE   2 (bases 1 to 288)
            Show all sequences for reference 2
  AUTHORS   Nelson,J.A.E.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-JUN-2009) Microbiology and Immunology, University of
	    North Carolina at Chapel Hill, CB 7290, Chapel Hill, NC 27599, USA
FEATURES             Location/Qualifiers
     source	     1..288
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="patient 9359"
		     /isolation_source="plasma"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="Malawi"
		     /collection_date="31-Jul-2006"
		     /note="subtype: C"
     gene	     <1..>288
		     /gene="pol"
     CDS	     <1..>288
		     /gene="pol"
		     /codon_start="1"
		     /transl_table="1"
		     /product="protease"
		     /protein_id="ACT33815.1"
		     /db_xref="GI:253720898"
		     /translation="TLWQRPLVTIKVGGQTREALLDTGADDTVLEEINLPGKWKPKMI
		     GGIGGFIKVRQYDQIVIEICGKKAXGSVLIGPTPVNIIGRNMLTQLGCTLNF"
BASE COUNT	107 a	  42 c	   66 g     71 t      2 other
ORIGIN
       1 actctttggc aacgacccct tgtcacaata aaagtagggg gccaaacaag ggaggctctc 
      61 ttagacacag gagcagatga tacagtatta gaagaaataa atttgccagg aaaatggaaa 
     121 ccaaaaatga tagggggaat tggaggtttt atcaaagtaa gacagtatga tcaaatagtt 
     181 atagaaattt gtggaaaaaa ggctrtaggt tcagtattaa tagggcctac acctgtcaac 
     241 ataattggaa ggaatatgtt gactcarctt ggatgcacac taaatttt
//
last modified: Tue May 31 10:56 2022


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