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LOCUS GQ228216 288 bp RNA linear VRL 15-JUL-2009
DEFINITION HIV-1 isolate patient 8990 from Malawi protease (pol) gene, partial
cds
ACCESSION GQ228216
VERSION GQ228216.1 GI:253720807
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 288)
Show all sequences for reference 1
AUTHORS Hosseinipour,M.C., van Oosterhout,J.J., Weigel,R., Phiri,S.,
Kamwendo,D., Parkin,N., Fiscus,S.A., Nelson,J.A., Eron,J.J. and
Kumwenda,J.
TITLE The public health approach to identify antiretroviral therapy
failure: high-level nucleoside reverse transcriptase inhibitor
resistance among Malawians failing first-line antiretroviral
therapy
JOURNAL AIDS 23 (9), 1127-1134 (2009)
PUBMED 19417582
REFERENCE 2 (bases 1 to 288)
Show all sequences for reference 2
AUTHORS Nelson,J.A.E.
TITLE Direct Submission
JOURNAL Submitted (02-JUN-2009) Microbiology and Immunology, University of
North Carolina at Chapel Hill, CB 7290, Chapel Hill, NC 27599, USA
FEATURES Location/Qualifiers
source 1..288
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="patient 8990"
/isolation_source="plasma"
/host="Homo sapiens"
/db_xref="taxon:11676"
/country="Malawi"
/collection_date="21-Jun-2007"
/note="subtype: C"
gene <1..>288
/gene="pol"
CDS <1..>288
/gene="pol"
/codon_start="1"
/transl_table="1"
/product="protease"
/protein_id="ACT33770.1"
/db_xref="GI:253720808"
/translation="TLWQRPLVTINIGGQTREALLDTGADDTVLEEINLPGRWKPKMI
GGIGGFIKVRQYDQIVIEICGKKAIGTVLVGPTPVNIIGRNMLTQLGCTLNF"
BASE COUNT 105 a 43 c 69 g 70 t 1 other
ORIGIN
1 actctttggc agcgacccct tgtcacaata aacatagggg gccagacaag ggaggctctc
61 ttagatacrg gagcagatga cacagtatta gaagaaataa atttgccagg aagatggaaa
121 ccaaaaatga taggaggaat tggaggtttt atcaaagtaa gacaatatga tcagatagtt
181 atagaaattt gtggaaaaaa ggctataggt acagtattag tgggacctac acctgtcaac
241 ataattggga gaaatatgtt gactcagctt ggatgcacac taaatttt
//
last modified: Tue May 31 10:56 2022