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LOCUS GQ118543 585 bp DNA linear VRL 07-FEB-2011
DEFINITION HIV-1 isolate ABPv3.04 from USA reverse transcriptase (pol) gene,
partial cds
ACCESSION GQ118543
VERSION GQ118543.1 GI:285027919
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 585)
Show all sequences for reference 1
AUTHORS Tazi,L., Imamichi,H., Hirschfeld,S., Metcalf,J.A., Orsega,S.,
Perez-Losada,M., Posada,D., Lane,H.C. and Crandall,K.A.
TITLE HIV-1 infected monozygotic twins: a tale of two outcomes.
JOURNAL BMC Evol Biol. 2011 Mar 8;11:62.
PUBMED 21385447
REFERENCE 2 (bases 1 to 585)
Show all sequences for reference 2
AUTHORS Imamichi,H., Tazi,L., Hirschfeld,S., Metcalf,J.A., Orsega,S.,
Perez-Losada,M., Posada,D., Lane,H.C. and Crandall,K.A.
TITLE Direct Submission
JOURNAL Submitted (06-MAY-2009) Clinical Services Program, SAIC-Frederick,
Inc., P.O. Box B, Bldg.550, Rm.201-A, Frederick, MD 21702, USA
FEATURES Location/Qualifiers
source 1..585
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="ABPv3.04"
/isolation_source="PBMC"
/host="Homo sapiens; male"
/db_xref="taxon:11676"
/country="USA"
/collection_date="1998"
gene <1..>585
/gene="pol"
CDS <1..>585
/gene="pol"
/codon_start="1"
/transl_table="1"
/product="reverse transcriptase"
/protein_id="ADC34305.1"
/db_xref="GI:285027920"
/translation="DFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTR
ILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLKWGFTTPDKKHQKE
PPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYAGIKVKQLCKL
LRGTKALTEVVPLTKEAELELAENREILKEPVHGV"
BASE COUNT 227 a 102 c 129 g 127 t
ORIGIN
1 gacttcagga agtatactgc atttacaata cctagtataa acaatgagac accagggatt
61 agatatcagt acaatgtact tccacaggga tggaaaggat caccagcaat attccaaagt
121 agcatgacaa gaatcttaga gccttttagg aaacaaaatc cagacatagt tatctatcaa
181 tacatggatg atttgtatgt aggatctgac ttagaaatag gacagcatag aacaaaaata
241 gaggaactga gacagcatct gttgaagtgg ggatttacca caccagacaa aaaacatcag
301 aaagaacccc cattcctttg gatgggttat gagctccatc ctgataaatg gacagtacag
361 cctatagtgc taccagaaaa agacagctgg actgtcaatg acatacagaa gttagtggga
421 aaattgaatt gggcaagtca gatttatgca gggattaaag taaagcaatt atgtaaactc
481 cttaggggaa ccaaagcact aacagaggta gtaccactaa caaaagaagc agagctagag
541 ctggcagaaa acagggagat tctaaaagaa ccagtacatg gagtg
//
last modified: Tue May 31 10:56 2022