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LOCUS	    FN554940		     202 bp    RNA     linear	VRL 30-SEP-2010
DEFINITION  Simian immunodeficiency virus partial polyprotein, integrase region
	    1, isolate SIVcpzPttCP2686
ACCESSION   FN554940
VERSION     FN554940.1 GI:308026202
KEYWORDS    .
SOURCE	    Simian immunodeficiency virus (SIV)
  ORGANISM  Simian immunodeficiency virus Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1
            Show all sequences for reference 1
  AUTHORS   Neel,C., Etienne,L., Li,Y., Takehisa,J., Rudicell,R.S., Bass,I.N.,
	    Ndong,I., Moudindo,J., Mebenga,A., Esteban,A., Van Heuverswyn,F.,
	    Liegeois,F., Kranzusch,P.J., Walsh,P.D., Sanz,C.M., Morgan,D.B.,
	    Ndjango,J.B., Plantier,J.C., Locatelli,S., Gonder,M.K.,
	    Leendertz,F.H., Boesch,C., Todd,A., Delaporte,E., Mpoudi Ngole,E.,
	    Hahn,B.H. and Peeters,M.
  TITLE     Molecular epidemiology of simian immunodeficiency virus infection
	    in wild-living gorillas
  JOURNAL   J. Virol. 84 (3), 1464-1476 (2010)
  PUBMED    19906908
REFERENCE   2 (bases 1 to 202)
            Show all sequences for reference 2
  AUTHORS   Etienne,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2009) Etienne L., UMR145 VIH/SIDA et Maladies
	    Associes, IRD, 911, av agropolis BP64501, Montpellier 34394, France
FEATURES             Location/Qualifiers
     source	     1..202
		     /organism="Simian immunodeficiency virus"
		     /mol_type="genomic RNA"
		     /isolate="SIVcpzPttCP2686"
		     /isolation_source="faeces"
		     /host="Pan troglodytes troglodytes"
		     /db_xref="taxon:11723"
		     /country="Cameroon"
     gene	     <1..>202
		     /gene="polyprotein"
     CDS	     <1..>202
		     /gene="polyprotein"
		     /codon_start="2"
		     /transl_table="1"
		     /protein_id="CBG76157.1"
		     /db_xref="GI:308026203"
		     /translation="KELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYTAGER
		     IVDIIATDIQTKELQKHILKIQK"
     mat_peptide     <1..>202
		     /gene="polyprotein"
		     /product="integrase"
BASE COUNT	 94 a	  26 c	   42 g     40 t
ORIGIN
       1 taaagaactt aaaaagatca ttggacaagt aagggatcaa gcagagcatt taaaaacagc 
      61 agtgcaaatg gcagtgttca ttcacaattt taaaagaaaa ggggggattg gggggtacac 
     121 tgcaggagag agaatagtag atattatagc aacagacata caaacaaaag aactacaaaa 
     181 acacatttta aaaattcaaa aa
//
last modified: Tue May 31 10:56 2022


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