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LOCUS	    FJ800441		    1058 bp    DNA     linear	VRL 01-APR-2009
DEFINITION  HIV-1 isolate HN-TR71 from Honduras pol protein (pol) gene, partial
	    cds
ACCESSION   FJ800441
VERSION     FJ800441.1 GI:225729377
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 1058)
            Show all sequences for reference 1
  AUTHORS   Murillo,W., de Rivera,I.L., Parham,L., Jovel,E., Palou,E.,
	    Karlsson,A.C. and Albert,J.
  TITLE     Prevalence of drug resistance and importance of viral load
	    measurements in Honduran HIV-infected patients failing
	    antiretroviral treatment.
  JOURNAL   HIV. Med.. 11(2); 95-103 (2010)
  PUBMED    19686436
REFERENCE   2 (bases 1 to 1058)
            Show all sequences for reference 2
  AUTHORS   Murillo,W., Lorenzana de Rivera,I., Parham,L., Jovel,E., Palou,E.,
	    Karlsson,A.C. and Albert,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-MAR-2009) Departamento de Microbiologia, Universidad
	    Nacional Autonoma de Honduras, Boul Suyapa, Ciudad Universitaria,
	    Edificio CB, 4to Piso, Tegucigalpa, Francisco Morazan, Honduras
FEATURES             Location/Qualifiers
     source	     1..1058
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="HN-TR71"
		     /isolation_source="heterosexual human"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="Honduras"
		     /collection_date="02-Aug-2006"
     gene	     <1..>1058
		     /gene="pol"
     CDS	     <1..>1058
		     /gene="pol"
		     /note="contains protease and reverse transcriptase"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="ACO24632.1"
		     /db_xref="GI:225729378"
		     /translation="PQVTLWQRPLVSIKIGGQIKEALLDTGADDTVLEEMNLPGRWKP
		     KMIGGIGGFIKVRQYEQIPVEIYGHRAIGTVLIGPTPVNIIGRNLLTQIGCTLNFPIS
		     PIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVF
		     AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKXKSVTVLDVGDAYFSVP
		     LDKDFRKYTAFTIPSXNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPD
		     MVIYQYMDDLYVGSDLEIGQHRAKIEELRQHLLRWGFTTPDKKHQKEPPFLWMGYELH
		     PDKWTVQPIMLPEKDSWTV"
BASE COUNT	406 a	 171 c	  223 g    248 t     10 other
ORIGIN
       1 cctcaggtca ctctttggca acgacccctc gtctcaataa agataggggg gcaaataaag 
      61 gaagctctat tggatacagg agcagatgat acagtattag aagaaatgaa tttgccagga 
     121 agatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acagtatgag 
     181 cagatacccg tagaaatcta cgggcataga gctataggta cagtattaat aggacctaca 
     241 cctgtcaata taattggaag aaatttattg actcagattg gttgcacttt aaattttccc 
     301 attagtccta ttgaaactgt accagtaaaa ttaaagccag gaatggatgg cccaaargtt 
     361 aaacaatggc cattgacaga agaaaaaata aaagcattag tagaaatttg tacagaaatg 
     421 gaaaaggaag gaaaaatttc aaaaattggg cctgagaatc catacaatac tccagtattt 
     481 gccataaaga aaaargacag tactaaatgg agaaaattag tagatttcag agagcttaat 
     541 aagagaactc aagacttctg ggaagttcaa ttaggaatac cacatcctgc agggttaaaa 
     601 aagaamaaat cagtaacagt actggatgtg ggtgatgcat atttttcagt tccattagat 
     661 aaagacttca ggaagtatac tgcattyacc ataccyagta yaaacaatga gacaccaggr 
     721 attagatatc agtacaatgt gcttccacag ggatggaaag gatcaccagc aatattccaa 
     781 agtagcatga caaaaatctt agagccyttt agaaaacaaa atccagayat ggtkatctat 
     841 caatacatgg atgatttgta tgtaggatct gacctagaaa tagggcaaca tagagcaaaa 
     901 atagaagaac tgagacaaca tctgttgagg tggggattta ccacaccaga caagaaacat 
     961 cagaaagaac ctccatttct ttggatgggt tatgaactcc atcctgataa atggacagtg 
    1021 cagcctataa tgctgccaga aaaagacagc tggactgt
//
last modified: Tue May 31 10:56 2022


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