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LOCUS FJ800419 1058 bp DNA linear VRL 01-APR-2009
DEFINITION HIV-1 isolate HN-TR47 from Honduras pol protein (pol) gene, partial
cds
ACCESSION FJ800419
VERSION FJ800419.1 GI:225729333
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 1058)
Show all sequences for reference 1
AUTHORS Murillo,W., de Rivera,I.L., Parham,L., Jovel,E., Palou,E.,
Karlsson,A.C. and Albert,J.
TITLE Prevalence of drug resistance and importance of viral load
measurements in Honduran HIV-infected patients failing
antiretroviral treatment.
JOURNAL HIV. Med.. 11(2); 95-103 (2010)
PUBMED 19686436
REFERENCE 2 (bases 1 to 1058)
Show all sequences for reference 2
AUTHORS Murillo,W., Lorenzana de Rivera,I., Parham,L., Jovel,E., Palou,E.,
Karlsson,A.C. and Albert,J.
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2009) Departamento de Microbiologia, Universidad
Nacional Autonoma de Honduras, Boul Suyapa, Ciudad Universitaria,
Edificio CB, 4to Piso, Tegucigalpa, Francisco Morazan, Honduras
FEATURES Location/Qualifiers
source 1..1058
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="HN-TR47"
/isolation_source="homosexual human"
/host="Homo sapiens"
/db_xref="taxon:11676"
/country="Honduras"
/collection_date="03-Nov-2005"
gene <1..>1058
/gene="pol"
CDS <1..>1058
/gene="pol"
/note="contains protease and reverse transcriptase"
/codon_start="1"
/transl_table="1"
/product="pol protein"
/protein_id="ACO24610.1"
/db_xref="GI:225729334"
/translation="PQITLWQRPLVAVRIGGELKEALLDTGADDTVLEEXNLPGRWKP
KMIGGIGGFIKVRQYDQIPVEICGHKAXGTVLVGPTPVNIIGRNLLTQIGCTLNFPIS
PIETVPVKLKPGMDGPRVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPIF
AIKKKBSTKWRKLVDFRELNKRTQDFWEVQLGIPHPSGLKKNKSVTXLDVGDAYFSVP
LDEDFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKENPD
IVIYQYVDDLYVGSDLEIGQHRAKIEELRQHLXRWGFYTPDXKHQKEPPFLWMGYELH
PDXWTVQPIVLPEKDSWTV"
BASE COUNT 395 a 178 c 223 g 243 t 19 other
ORIGIN
1 cctcagatca ctctttggca acgacccctc gtygcagtaa ggataggggg ggaactaaag
61 gaagctctat tagacacagg agcagatgat acagtattag aagaaakgaa tttgccagga
121 agrtggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acagtatgat
181 cagataccag trgaaatytg tggrcataaa gctrtaggta cagtattagt aggacccaca
241 cctgtcaaca taattggaag aaatctgttg actcagattg gttgcacttt aaatttyccc
301 attagtccta ttgaaactgt accagtaaaa ctaaaaccag gratggatgg cccwagagtt
361 aaacaatggc cattgacaga agaaaaaata aaagcattag tagaaatttg tacagaaatg
421 gaaaaggaag graaaatttc aaaaattggg cctgaaaatc catacaatac tccaatattt
481 gccataaaga aaaagracag tactaaatgg agaaaattag tagatttcag agaacttaat
541 aagagaactc aagacttctg ggargttcag ttaggaatac cacatccctc agggttaaaa
601 aagaacaaat cagtaacart actrgatgtg ggtgatgcat atttctcagt tcccttagat
661 gaagacttca ggaagtatac tgcattcacc atacccagta caaacaatga gacwccaggg
721 attagatatc agtacaatgt gcttccacaa ggatggaaag gatcaccagc aatattccaa
781 agtagcatga caaaaatctt agagcctttt agaaaagaaa atccagacat agtcatctat
841 caatacgtgg atgatttgta tgtaggatct gacttagaaa taggacagca tagagcaaaa
901 atagaggaac tgagacaaca tctgtkgaga tgggggtttt acacaccaga craaaaacat
961 cagaaagaac ctccatttct ttggatgggt tatgaactcc atcctgataa mtggacagta
1021 cagcctatag tgctgccaga aaaggacagc tggactgt
//
last modified: Tue May 31 10:56 2022