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LOCUS	    FJ800419		    1058 bp    DNA     linear	VRL 01-APR-2009
DEFINITION  HIV-1 isolate HN-TR47 from Honduras pol protein (pol) gene, partial
	    cds
ACCESSION   FJ800419
VERSION     FJ800419.1 GI:225729333
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 1058)
            Show all sequences for reference 1
  AUTHORS   Murillo,W., de Rivera,I.L., Parham,L., Jovel,E., Palou,E.,
	    Karlsson,A.C. and Albert,J.
  TITLE     Prevalence of drug resistance and importance of viral load
	    measurements in Honduran HIV-infected patients failing
	    antiretroviral treatment.
  JOURNAL   HIV. Med.. 11(2); 95-103 (2010)
  PUBMED    19686436
REFERENCE   2 (bases 1 to 1058)
            Show all sequences for reference 2
  AUTHORS   Murillo,W., Lorenzana de Rivera,I., Parham,L., Jovel,E., Palou,E.,
	    Karlsson,A.C. and Albert,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-MAR-2009) Departamento de Microbiologia, Universidad
	    Nacional Autonoma de Honduras, Boul Suyapa, Ciudad Universitaria,
	    Edificio CB, 4to Piso, Tegucigalpa, Francisco Morazan, Honduras
FEATURES             Location/Qualifiers
     source	     1..1058
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="HN-TR47"
		     /isolation_source="homosexual human"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="Honduras"
		     /collection_date="03-Nov-2005"
     gene	     <1..>1058
		     /gene="pol"
     CDS	     <1..>1058
		     /gene="pol"
		     /note="contains protease and reverse transcriptase"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="ACO24610.1"
		     /db_xref="GI:225729334"
		     /translation="PQITLWQRPLVAVRIGGELKEALLDTGADDTVLEEXNLPGRWKP
		     KMIGGIGGFIKVRQYDQIPVEICGHKAXGTVLVGPTPVNIIGRNLLTQIGCTLNFPIS
		     PIETVPVKLKPGMDGPRVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPIF
		     AIKKKBSTKWRKLVDFRELNKRTQDFWEVQLGIPHPSGLKKNKSVTXLDVGDAYFSVP
		     LDEDFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKENPD
		     IVIYQYVDDLYVGSDLEIGQHRAKIEELRQHLXRWGFYTPDXKHQKEPPFLWMGYELH
		     PDXWTVQPIVLPEKDSWTV"
BASE COUNT	395 a	 178 c	  223 g    243 t     19 other
ORIGIN
       1 cctcagatca ctctttggca acgacccctc gtygcagtaa ggataggggg ggaactaaag 
      61 gaagctctat tagacacagg agcagatgat acagtattag aagaaakgaa tttgccagga 
     121 agrtggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acagtatgat 
     181 cagataccag trgaaatytg tggrcataaa gctrtaggta cagtattagt aggacccaca 
     241 cctgtcaaca taattggaag aaatctgttg actcagattg gttgcacttt aaatttyccc 
     301 attagtccta ttgaaactgt accagtaaaa ctaaaaccag gratggatgg cccwagagtt 
     361 aaacaatggc cattgacaga agaaaaaata aaagcattag tagaaatttg tacagaaatg 
     421 gaaaaggaag graaaatttc aaaaattggg cctgaaaatc catacaatac tccaatattt 
     481 gccataaaga aaaagracag tactaaatgg agaaaattag tagatttcag agaacttaat 
     541 aagagaactc aagacttctg ggargttcag ttaggaatac cacatccctc agggttaaaa 
     601 aagaacaaat cagtaacart actrgatgtg ggtgatgcat atttctcagt tcccttagat 
     661 gaagacttca ggaagtatac tgcattcacc atacccagta caaacaatga gacwccaggg 
     721 attagatatc agtacaatgt gcttccacaa ggatggaaag gatcaccagc aatattccaa 
     781 agtagcatga caaaaatctt agagcctttt agaaaagaaa atccagacat agtcatctat 
     841 caatacgtgg atgatttgta tgtaggatct gacttagaaa taggacagca tagagcaaaa 
     901 atagaggaac tgagacaaca tctgtkgaga tgggggtttt acacaccaga craaaaacat 
     961 cagaaagaac ctccatttct ttggatgggt tatgaactcc atcctgataa mtggacagta 
    1021 cagcctatag tgctgccaga aaaggacagc tggactgt
//
last modified: Tue May 31 10:56 2022


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