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LOCUS FJ800392 1058 bp DNA linear VRL 01-APR-2009
DEFINITION HIV-1 isolate HN-TR19 from Honduras pol protein (pol) gene, partial
cds
ACCESSION FJ800392
VERSION FJ800392.1 GI:225729279
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 1058)
Show all sequences for reference 1
AUTHORS Murillo,W., de Rivera,I.L., Parham,L., Jovel,E., Palou,E.,
Karlsson,A.C. and Albert,J.
TITLE Prevalence of drug resistance and importance of viral load
measurements in Honduran HIV-infected patients failing
antiretroviral treatment.
JOURNAL HIV. Med.. 11(2); 95-103 (2010)
PUBMED 19686436
REFERENCE 2 (bases 1 to 1058)
Show all sequences for reference 2
AUTHORS Murillo,W., Lorenzana de Rivera,I., Parham,L., Jovel,E., Palou,E.,
Karlsson,A.C. and Albert,J.
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2009) Departamento de Microbiologia, Universidad
Nacional Autonoma de Honduras, Boul Suyapa, Ciudad Universitaria,
Edificio CB, 4to Piso, Tegucigalpa, Francisco Morazan, Honduras
FEATURES Location/Qualifiers
source 1..1058
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="HN-TR19"
/isolation_source="heterosexual human"
/host="Homo sapiens"
/db_xref="taxon:11676"
/country="Honduras"
/collection_date="19-Apr-2005"
gene <1..>1058
/gene="pol"
CDS <1..>1058
/gene="pol"
/note="contains protease and reverse transcriptase"
/codon_start="1"
/transl_table="1"
/product="pol protein"
/protein_id="ACO24583.1"
/db_xref="GI:225729280"
/translation="PQITLWQRPLVTIRIGGQLKEALLDTGADDTVLEEMNLPGKWKP
KMIGGIGGFIKVRQYDQIPIEICGHRAVGTVLIGPTPVNIIGRNLLTQIGCTLNFPIS
PIETVPVKLKPGMDGPKVKQWPLTEEKIKALIEICTELEKEGKISKIGPENPYNTPVF
VIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPSGLKRNKSVTVLDVGDAYFSVP
LDKEFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKENPD
IVIYQYVDDLYVGSDLEIEQHRTKIEELRQHLWRWGFYTPDKKHQKEHPFRWMGYELH
PBKWTVQPIVLPEKDSWTV"
BASE COUNT 408 a 174 c 224 g 250 t 2 other
ORIGIN
1 cctcagatca ctctttggca acgacccctc gtcacaataa ggataggggg gcaactaaag
61 gaagctctat tagacacagg agcagatgat acagtactag aagaaatgaa tttgccaggg
121 aaatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acagtatgat
181 cagataccaa tagaaatctg tggacataga gctgtgggta cagtattaat aggacccaca
241 cctgtcaaca taattggaag aaatctgttg actcagattg ggtgcacttt aaattttccc
301 attagtccta ttgaaactgt accagtaaaa ttgaagccag gaatggatgg cccaaaagtt
361 aaacaatggc cattgacaga agaaaaaata aaggcattaa tagaaatttg tacagaattg
421 gaaaaggaag gaaaaatttc aaaaattggg cctgaaaatc catacaatac tccagtattt
481 gtcataaaga aaaaagacag tactaaatgg agaaaattag tagatttcag agaacttaat
541 aaaagaactc aagacttctg ggaagttcaa ttaggaatac cacatccctc agggttaaaa
601 aggaacaaat cagtgacagt attggatgtg ggtgatgcat atttttcagt tcccttagat
661 aaagaattca ggaagtatac tgcattcacc atacctagta caaacaatga gacaccaggg
721 attagatatc agtacaatgt acttccacaa ggatggaaag gatctccagc aatattccaa
781 agtagtatga caaaaatctt ggagcctttt agaaaagaaa atccagacat agttatctat
841 caatacgtgg atgatttata tgtaggatct gacttagaaa tagagcagca tagaacaaaa
901 atagaggaac tgagacaaca tctgtggagg tggggatttt acacaccaga caaaaaacat
961 cagaaagaac atccgtttcg ttggatgggt tatgaactcc atcccrataa atggacagta
1021 cagcctatag tgctgccaga aaargacagc tggactgt
//
last modified: Tue May 31 10:56 2022