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LOCUS	    FJ800392		    1058 bp    DNA     linear	VRL 01-APR-2009
DEFINITION  HIV-1 isolate HN-TR19 from Honduras pol protein (pol) gene, partial
	    cds
ACCESSION   FJ800392
VERSION     FJ800392.1 GI:225729279
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 1058)
            Show all sequences for reference 1
  AUTHORS   Murillo,W., de Rivera,I.L., Parham,L., Jovel,E., Palou,E.,
	    Karlsson,A.C. and Albert,J.
  TITLE     Prevalence of drug resistance and importance of viral load
	    measurements in Honduran HIV-infected patients failing
	    antiretroviral treatment.
  JOURNAL   HIV. Med.. 11(2); 95-103 (2010)
  PUBMED    19686436
REFERENCE   2 (bases 1 to 1058)
            Show all sequences for reference 2
  AUTHORS   Murillo,W., Lorenzana de Rivera,I., Parham,L., Jovel,E., Palou,E.,
	    Karlsson,A.C. and Albert,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-MAR-2009) Departamento de Microbiologia, Universidad
	    Nacional Autonoma de Honduras, Boul Suyapa, Ciudad Universitaria,
	    Edificio CB, 4to Piso, Tegucigalpa, Francisco Morazan, Honduras
FEATURES             Location/Qualifiers
     source	     1..1058
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="HN-TR19"
		     /isolation_source="heterosexual human"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="Honduras"
		     /collection_date="19-Apr-2005"
     gene	     <1..>1058
		     /gene="pol"
     CDS	     <1..>1058
		     /gene="pol"
		     /note="contains protease and reverse transcriptase"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="ACO24583.1"
		     /db_xref="GI:225729280"
		     /translation="PQITLWQRPLVTIRIGGQLKEALLDTGADDTVLEEMNLPGKWKP
		     KMIGGIGGFIKVRQYDQIPIEICGHRAVGTVLIGPTPVNIIGRNLLTQIGCTLNFPIS
		     PIETVPVKLKPGMDGPKVKQWPLTEEKIKALIEICTELEKEGKISKIGPENPYNTPVF
		     VIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPSGLKRNKSVTVLDVGDAYFSVP
		     LDKEFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKENPD
		     IVIYQYVDDLYVGSDLEIEQHRTKIEELRQHLWRWGFYTPDKKHQKEHPFRWMGYELH
		     PBKWTVQPIVLPEKDSWTV"
BASE COUNT	408 a	 174 c	  224 g    250 t      2 other
ORIGIN
       1 cctcagatca ctctttggca acgacccctc gtcacaataa ggataggggg gcaactaaag 
      61 gaagctctat tagacacagg agcagatgat acagtactag aagaaatgaa tttgccaggg 
     121 aaatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acagtatgat 
     181 cagataccaa tagaaatctg tggacataga gctgtgggta cagtattaat aggacccaca 
     241 cctgtcaaca taattggaag aaatctgttg actcagattg ggtgcacttt aaattttccc 
     301 attagtccta ttgaaactgt accagtaaaa ttgaagccag gaatggatgg cccaaaagtt 
     361 aaacaatggc cattgacaga agaaaaaata aaggcattaa tagaaatttg tacagaattg 
     421 gaaaaggaag gaaaaatttc aaaaattggg cctgaaaatc catacaatac tccagtattt 
     481 gtcataaaga aaaaagacag tactaaatgg agaaaattag tagatttcag agaacttaat 
     541 aaaagaactc aagacttctg ggaagttcaa ttaggaatac cacatccctc agggttaaaa 
     601 aggaacaaat cagtgacagt attggatgtg ggtgatgcat atttttcagt tcccttagat 
     661 aaagaattca ggaagtatac tgcattcacc atacctagta caaacaatga gacaccaggg 
     721 attagatatc agtacaatgt acttccacaa ggatggaaag gatctccagc aatattccaa 
     781 agtagtatga caaaaatctt ggagcctttt agaaaagaaa atccagacat agttatctat 
     841 caatacgtgg atgatttata tgtaggatct gacttagaaa tagagcagca tagaacaaaa 
     901 atagaggaac tgagacaaca tctgtggagg tggggatttt acacaccaga caaaaaacat 
     961 cagaaagaac atccgtttcg ttggatgggt tatgaactcc atcccrataa atggacagta 
    1021 cagcctatag tgctgccaga aaargacagc tggactgt
//
last modified: Tue May 31 10:56 2022


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