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LOCUS	    FJ530654		     736 bp    DNA     linear	VRL 01-FEB-2009
DEFINITION  HIV-1 isolate in110rt from India reverse transcriptase (pol) gene,
	    partial cds
ACCESSION   FJ530654
VERSION     FJ530654.1 GI:221858353
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 736)
            Show all sequences for reference 1
  AUTHORS   Deshpande,A., Jauvin,V., Pinson,P., Jeannot,A.C. and Fleury,H.J.
  TITLE     Phylogenetic analysis of HIV-1 reverse transcriptase sequences from
	    382 patients recruited in JJ Hospital of Mumbai, India, between
	    2002 and 2008.
  JOURNAL   AIDS Res. Hum. Retroviruses. 25(6); 633-5 (2009)
  PUBMED    19534630
REFERENCE   2 (bases 1 to 736)
            Show all sequences for reference 2
  AUTHORS   Fleury,H.J., Jauvin,V., Pinson,P., Jeannot,A.C. and Deshpande,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-DEC-2008) Universite Bordeaux 2, Laboratoire de
	    Virologie EA2968, 146 rue Leo Saignat, Bordeaux 33076, France
FEATURES             Location/Qualifiers
     source	     1..736
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="in110rt"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="India"
		     /collection_date="2003"
     gene	     <1..>736
		     /gene="pol"
     CDS	     <1..>736
		     /gene="pol"
		     /codon_start="3"
		     /transl_table="1"
		     /product="reverse transcriptase"
		     /protein_id="ACM41127.1"
		     /db_xref="GI:221858354"
		     /translation="LKPGMDGPKVKQWPLTEEKIKALTAICDEMEKEGKITKIGPENP
		     YNTPIFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGD
		     AYFSVPLXEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPF
		     RERNPELVIYQYMDDLYVGSDLEIGQHRAKIEELREHLLKWGFTTPDKKHQKEPPFLW
		     MGYELHPDKWTVQPIQLPEKDSWTVN"
BASE COUNT	294 a	 119 c	  154 g    167 t      2 other
ORIGIN
       1 aattaaagcc aggaatggat ggcccaaagg ttaaacaatg gccattgaca gaagagaaaa 
      61 taaaagcatt aacagcaatt tgtgatgaaa tggaaaagga aggaaaaatt acaaaaattg 
     121 ggcctgaaaa tccatataac actccaatat ttgccataaa aaagaaggac agtactaagt 
     181 ggagaaaatt agtagatttc agggaactca ataaaagaac tcaagatttt tgggaagttc 
     241 aattaggaat accacaccca gcagggttaa aaaagaaaaa rtcagtgaca gtactggatg 
     301 tgggggatgc atatttttca gttcctttat rtgaagactt caggaaatat actgcattca 
     361 ccatacctag tataaacaat gaaacaccag ggattaggta tcaatataat gtgcttccac 
     421 agggatggaa aggatcacca gcaatattcc agagtagcat gacaaaaatc ttagagccct 
     481 ttagggaaag aaatccagaa ctagtcatct atcaatatat ggatgacttg tatgtaggat 
     541 ctgacttaga aatagggcaa catagagcaa aaatagaaga gttaagagaa catctgttaa 
     601 agtggggatt taccacacca gacaagaaac atcagaaaga acctccattt ctttggatgg 
     661 ggtatgaact ccatcctgac aaatggacag tacagcctat acagctgcca gaaaaagata 
     721 gctggactgt caatga
//
last modified: Tue May 31 10:56 2022


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