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LOCUS FJ530654 736 bp DNA linear VRL 01-FEB-2009
DEFINITION HIV-1 isolate in110rt from India reverse transcriptase (pol) gene,
partial cds
ACCESSION FJ530654
VERSION FJ530654.1 GI:221858353
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 736)
Show all sequences for reference 1
AUTHORS Deshpande,A., Jauvin,V., Pinson,P., Jeannot,A.C. and Fleury,H.J.
TITLE Phylogenetic analysis of HIV-1 reverse transcriptase sequences from
382 patients recruited in JJ Hospital of Mumbai, India, between
2002 and 2008.
JOURNAL AIDS Res. Hum. Retroviruses. 25(6); 633-5 (2009)
PUBMED 19534630
REFERENCE 2 (bases 1 to 736)
Show all sequences for reference 2
AUTHORS Fleury,H.J., Jauvin,V., Pinson,P., Jeannot,A.C. and Deshpande,A.
TITLE Direct Submission
JOURNAL Submitted (05-DEC-2008) Universite Bordeaux 2, Laboratoire de
Virologie EA2968, 146 rue Leo Saignat, Bordeaux 33076, France
FEATURES Location/Qualifiers
source 1..736
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="in110rt"
/host="Homo sapiens"
/db_xref="taxon:11676"
/country="India"
/collection_date="2003"
gene <1..>736
/gene="pol"
CDS <1..>736
/gene="pol"
/codon_start="3"
/transl_table="1"
/product="reverse transcriptase"
/protein_id="ACM41127.1"
/db_xref="GI:221858354"
/translation="LKPGMDGPKVKQWPLTEEKIKALTAICDEMEKEGKITKIGPENP
YNTPIFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGD
AYFSVPLXEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPF
RERNPELVIYQYMDDLYVGSDLEIGQHRAKIEELREHLLKWGFTTPDKKHQKEPPFLW
MGYELHPDKWTVQPIQLPEKDSWTVN"
BASE COUNT 294 a 119 c 154 g 167 t 2 other
ORIGIN
1 aattaaagcc aggaatggat ggcccaaagg ttaaacaatg gccattgaca gaagagaaaa
61 taaaagcatt aacagcaatt tgtgatgaaa tggaaaagga aggaaaaatt acaaaaattg
121 ggcctgaaaa tccatataac actccaatat ttgccataaa aaagaaggac agtactaagt
181 ggagaaaatt agtagatttc agggaactca ataaaagaac tcaagatttt tgggaagttc
241 aattaggaat accacaccca gcagggttaa aaaagaaaaa rtcagtgaca gtactggatg
301 tgggggatgc atatttttca gttcctttat rtgaagactt caggaaatat actgcattca
361 ccatacctag tataaacaat gaaacaccag ggattaggta tcaatataat gtgcttccac
421 agggatggaa aggatcacca gcaatattcc agagtagcat gacaaaaatc ttagagccct
481 ttagggaaag aaatccagaa ctagtcatct atcaatatat ggatgacttg tatgtaggat
541 ctgacttaga aatagggcaa catagagcaa aaatagaaga gttaagagaa catctgttaa
601 agtggggatt taccacacca gacaagaaac atcagaaaga acctccattt ctttggatgg
661 ggtatgaact ccatcctgac aaatggacag tacagcctat acagctgcca gaaaaagata
721 gctggactgt caatga
//
last modified: Tue May 31 10:56 2022