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LOCUS	    FJ530609		     767 bp    DNA     linear	VRL 01-FEB-2009
DEFINITION  HIV-1 isolate in61rt from India reverse transcriptase (pol) gene,
	    partial cds
ACCESSION   FJ530609
VERSION     FJ530609.1 GI:221858249
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 767)
            Show all sequences for reference 1
  AUTHORS   Deshpande,A., Jauvin,V., Pinson,P., Jeannot,A.C. and Fleury,H.J.
  TITLE     Phylogenetic analysis of HIV-1 reverse transcriptase sequences from
	    382 patients recruited in JJ Hospital of Mumbai, India, between
	    2002 and 2008.
  JOURNAL   AIDS Res. Hum. Retroviruses. 25(6); 633-5 (2009)
  PUBMED    19534630
REFERENCE   2 (bases 1 to 767)
            Show all sequences for reference 2
  AUTHORS   Fleury,H.J., Jauvin,V., Pinson,P., Jeannot,A.C. and Deshpande,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-DEC-2008) Universite Bordeaux 2, Laboratoire de
	    Virologie EA2968, 146 rue Leo Saignat, Bordeaux 33076, France
FEATURES             Location/Qualifiers
     source	     1..767
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="in61rt"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="India"
		     /collection_date="2002"
     gene	     <1..>767
		     /gene="pol"
     CDS	     <1..>767
		     /gene="pol"
		     /codon_start="1"
		     /transl_table="1"
		     /product="reverse transcriptase"
		     /protein_id="ACM41082.1"
		     /db_xref="GI:221858250"
		     /translation="PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTAICDEMEKE
		     GKITKIGPDNPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKK
		     KKSVTVLDVGDAYFSVPLDKNFRKYTAFTIPSINNETPGVRYQYNVLPQGWKGSPAIF
		     QSSMIRILEPFRARNPELVIYQYMDDLYVGSDLEIGQHRAKIEELREHLLKWGLTTPD
		     KKHQKEPPFLWMGYELHPDKWTVQPIQLPEKDSWTVN"
BASE COUNT	302 a	 130 c	  161 g    174 t
ORIGIN
       1 ccaattagtc ctattgaaac tgtaccagta aaattaaagc caggaatgga tggcccaaag 
      61 gttaaacaat ggccattgac agaagagaaa ataaaagcat taacagcaat ttgtgatgaa 
     121 atggagaagg aaggaaaaat tacaaaaatt gggcctgaca atccatataa cactccaata 
     181 tttgccataa aaaagaagga cagtactaag tggagaaaat tagtagattt cagggaactc 
     241 aataaaagaa ctcaagattt ttgggaagtt caattaggaa taccacaccc agcagggtta 
     301 aaaaagaaaa aatcagtgac agtactggat gtgggggatg catatttttc agttccccta 
     361 gataagaact tcaggaaata tactgcattc accataccta gtataaacaa tgaaacacca 
     421 ggggttaggt atcaatataa tgtgcttcca cagggatgga aaggatcacc agcaatattt 
     481 cagagtagca tgataagaat cttagagccc tttagggcac gaaatccaga attagtcatc 
     541 tatcaatata tggatgactt atatgtagga tctgacttag aaatagggca acatagagca 
     601 aaaatagagg agttaagaga acatctgtta aagtggggac ttaccacacc agacaagaaa 
     661 catcagaaag aacccccatt tctttggatg gggtatgaac tccatcctga caaatggaca 
     721 gtacagccta tacagctgcc agaaaaagat agctggactg tcaatga
//
last modified: Tue May 31 10:56 2022


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