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LOCUS FJ530609 767 bp DNA linear VRL 01-FEB-2009
DEFINITION HIV-1 isolate in61rt from India reverse transcriptase (pol) gene,
partial cds
ACCESSION FJ530609
VERSION FJ530609.1 GI:221858249
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 767)
Show all sequences for reference 1
AUTHORS Deshpande,A., Jauvin,V., Pinson,P., Jeannot,A.C. and Fleury,H.J.
TITLE Phylogenetic analysis of HIV-1 reverse transcriptase sequences from
382 patients recruited in JJ Hospital of Mumbai, India, between
2002 and 2008.
JOURNAL AIDS Res. Hum. Retroviruses. 25(6); 633-5 (2009)
PUBMED 19534630
REFERENCE 2 (bases 1 to 767)
Show all sequences for reference 2
AUTHORS Fleury,H.J., Jauvin,V., Pinson,P., Jeannot,A.C. and Deshpande,A.
TITLE Direct Submission
JOURNAL Submitted (05-DEC-2008) Universite Bordeaux 2, Laboratoire de
Virologie EA2968, 146 rue Leo Saignat, Bordeaux 33076, France
FEATURES Location/Qualifiers
source 1..767
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="in61rt"
/host="Homo sapiens"
/db_xref="taxon:11676"
/country="India"
/collection_date="2002"
gene <1..>767
/gene="pol"
CDS <1..>767
/gene="pol"
/codon_start="1"
/transl_table="1"
/product="reverse transcriptase"
/protein_id="ACM41082.1"
/db_xref="GI:221858250"
/translation="PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTAICDEMEKE
GKITKIGPDNPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKK
KKSVTVLDVGDAYFSVPLDKNFRKYTAFTIPSINNETPGVRYQYNVLPQGWKGSPAIF
QSSMIRILEPFRARNPELVIYQYMDDLYVGSDLEIGQHRAKIEELREHLLKWGLTTPD
KKHQKEPPFLWMGYELHPDKWTVQPIQLPEKDSWTVN"
BASE COUNT 302 a 130 c 161 g 174 t
ORIGIN
1 ccaattagtc ctattgaaac tgtaccagta aaattaaagc caggaatgga tggcccaaag
61 gttaaacaat ggccattgac agaagagaaa ataaaagcat taacagcaat ttgtgatgaa
121 atggagaagg aaggaaaaat tacaaaaatt gggcctgaca atccatataa cactccaata
181 tttgccataa aaaagaagga cagtactaag tggagaaaat tagtagattt cagggaactc
241 aataaaagaa ctcaagattt ttgggaagtt caattaggaa taccacaccc agcagggtta
301 aaaaagaaaa aatcagtgac agtactggat gtgggggatg catatttttc agttccccta
361 gataagaact tcaggaaata tactgcattc accataccta gtataaacaa tgaaacacca
421 ggggttaggt atcaatataa tgtgcttcca cagggatgga aaggatcacc agcaatattt
481 cagagtagca tgataagaat cttagagccc tttagggcac gaaatccaga attagtcatc
541 tatcaatata tggatgactt atatgtagga tctgacttag aaatagggca acatagagca
601 aaaatagagg agttaagaga acatctgtta aagtggggac ttaccacacc agacaagaaa
661 catcagaaag aacccccatt tctttggatg gggtatgaac tccatcctga caaatggaca
721 gtacagccta tacagctgcc agaaaaagat agctggactg tcaatga
//
last modified: Tue May 31 10:56 2022