View NCBI entry Download GenBank file Graphics View Download GFF3 File
LOCUS FJ480958 441 bp DNA linear VRL 23-DEC-2008
DEFINITION Simian immunodeficiency virus isolate 1/04L-1 envelope glycoprotein
(env) gene, partial cds
ACCESSION FJ480958
VERSION FJ480958.1 GI:218456606
KEYWORDS .
SOURCE Simian immunodeficiency virus (SIV)
ORGANISM Simian immunodeficiency virus Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 441)
Show all sequences for reference 1
AUTHORS Rivera-Amill,V., Noel,R.J.J., Roman,I.R., Flores,Y.G., Buch,S. and
Kumar,A.
TITLE Analysis of the V1V2 region of the SIV envelope in the brains of
morphine-dependent and control SIV/SHIV-infected macaques.
JOURNAL AIDS Res. Hum. Retroviruses. 25(5); 531-4 (2009)
PUBMED 19397400
REFERENCE 2 (bases 1 to 441)
Show all sequences for reference 2
AUTHORS Rivera-Amill,V., Noel,R.J. Jr.., Rivera Roman,I., Garcia Flores,Y.
and Kumar,A.
TITLE Direct Submission
JOURNAL Submitted (20-NOV-2008) Microbiology, Ponce School of Medicine,
Research Building 395 Zona Industrial Reparada 2, Ponce, PR 00716,
USA
FEATURES Location/Qualifiers
source 1..441
/organism="Simian immunodeficiency virus"
/proviral="Simian immunodeficiency virus"
/mol_type="genomic DNA"
/isolate="1/04L-1"
/isolation_source="brain tissue"
/host="Macaca mulatta"
/db_xref="taxon:11723"
/country="Puerto Rico"
/note="collected between 2003-2004"
gene <1..>441
/gene="env"
CDS <1..>441
/gene="env"
/codon_start="1"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="ACK77422.1"
/db_xref="GI:218456607"
/translation="EDVWQLFETSIKPCVKLSPLCITMRCNKSETDRWGLTKSITTTA
STTSTTASARVDMVNETSSCIAQDNCIGLEQEQMISCKFNMTGLNRDKKKEYNETWYS
ADLVCEQGNNTGNESRCYMNHCNTSVIKESCDKHYWDAIRFRYCA"
BASE COUNT 168 a 69 c 94 g 110 t
ORIGIN
1 gaggatgtat ggcaactctt tgagacctca ataaagcctt gtgtaaaatt atccccatta
61 tgcattacta tgagatgcaa taaaagtgag acagatagat ggggattgac aaaatcaata
121 acaacaacag catcaacaac atcaacgaca gcatcagcaa gagtagacat ggtcaatgag
181 actagttctt gtatagccca ggataattgc ataggcttgg aacaagagca aatgataagc
241 tgtaaattca acatgacagg gttaaataga gacaagaaaa aagagtacaa tgaaacctgg
301 tactctgcag atttggtatg tgaacaaggg aataacactg gtaatgaaag tagatgttac
361 atgaaccact gtaacacttc tgttatcaaa gagtcttgtg acaaacatta ttgggatgct
421 attagattta ggtattgtgc a
//
last modified: Tue May 31 10:56 2022