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LOCUS FJ442052 897 bp DNA linear VRL 28-APR-2009
DEFINITION HIV-2 isolate 17B11 from United Kingdom integrase (pol) gene,
partial cds
ACCESSION FJ442052
VERSION FJ442052.1 GI:227430736
KEYWORDS .
SOURCE Human immunodeficiency virus 2 (HIV-2)
ORGANISM Human immunodeficiency virus 2 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 897)
Show all sequences for reference 1
AUTHORS Xu,L., Anderson,J., Garrett,N., Ferns,B., Wildfire,A., Cook,P.,
Workman,J., Graham,S. and Smit,E.
TITLE Dynamics of raltegravir resistance profile in an HIV type
2-infected patient.
JOURNAL AIDS Res. Hum. Retroviruses. 25(8); 843-7 (2009)
PUBMED 19618998
REFERENCE 2 (bases 1 to 897)
Show all sequences for reference 2
AUTHORS Xu,L., Anderson,J., Garrett,N. and Smit,E.
TITLE Direct Submission
JOURNAL Submitted (06-NOV-2008) Health Protection Agency, Heart of England
NHS Foundation Trust, Birmingham B9 5SS, U.K.
FEATURES Location/Qualifiers
source 1..897
/organism="Human immunodeficiency virus 2"
/proviral="Human immunodeficiency virus 2"
/mol_type="genomic DNA"
/isolate="17B11"
/host="Homo sapiens"
/db_xref="taxon:11709"
/country="United Kingdom"
/collection_date="29-Sep-2007"
gene <1..>897
/gene="pol"
CDS <1..>897
/gene="pol"
/codon_start="1"
/transl_table="1"
/product="integrase"
/protein_id="ACP28355.1"
/db_xref="GI:227430737"
/translation="FLEKIEPAQEEHEKYHGNVKELVHKFGIPQLVAKQIVNSCDKCQ
QKGEAIHGQVNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPRETGRQAALFLL
KLASRWPITHLHTDNGANFTSQDVKMVAWWVGIEQTFGVPCNPQSQGVVEAMNHHLKN
QIDRLRDQAVSIETVVLMATHCMNFKRRGGIGDMTPAERLVNMITTEQEIQFLQAKNL
KFKTFQVYYREGRDQLWKGPGELLWKGEGAVIIKVGTEIKVVPRRKAKIIRHYGGGKE
LDRSADMEDTRQAGEVAQSDQVP"
BASE COUNT 345 a 160 c 217 g 175 t
ORIGIN
1 ttcttagaaa agatagaacc agcacaggaa gagcatgaaa aatatcatgg caatgtaaaa
61 gaactagtcc ataaatttgg aatcccacaa ttagtggcaa aacagatagt aaattcctgt
121 gataaatgcc aacaaaaagg ggaagctatt catggacagg taaatgcaga actaggaaca
181 tggcagatgg actgtacaca tttagaagga aaaattataa tagtggcagt ccatgtagcc
241 agtgggttta tagaagcaga agtaatacct cgggaaacag gaagacaggc agctctcttc
301 ctgttaaaac tggccagcag atggcctatc acacacctgc acacagacaa cggtgccaac
361 ttcacctcac aagatgtgaa gatggtagcc tggtgggtag gaatagagca aacctttgga
421 gtaccctgta acccacaaag tcaaggagta gtagaagcga tgaaccatca tctaaaaaat
481 caaatagaca gactcagaga tcaagcagta tcaatagaga cagttgtact aatggcaact
541 cactgcatga attttaaaag aaggggagga ataggggata tgacccctgc agaaagacta
601 gttaacatga taaccacaga gcaagaaata cagttcctcc aagcaaaaaa tttaaaattc
661 aaaactttcc aggtctatta cagagaaggc agagatcaac tctggaaggg acctggtgaa
721 ctattgtgga aaggggaagg agcagtcatc ataaaggtag ggacagaaat caaagtagta
781 cccagaagaa aagcaaaaat tataaggcac tatggaggag gaaaagagtt ggatcgtagt
841 gccgacatgg aagataccag gcaggctgga gaggtggcac agtctgatca agtacct
//
last modified: Tue May 31 10:56 2022