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LOCUS	    EU908751		     839 bp    RNA     linear	VRL 23-SEP-2008
DEFINITION  HIV-1 isolate pt6w20 from Italy integrase (pol) gene, partial cds
ACCESSION   EU908751
VERSION     EU908751.1 GI:204304588
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 839)
            Show all sequences for reference 1
  AUTHORS   Canducci,F., Sampaolo,M., Marinozzi,M.C., Boeri,E., Spagnuolo,V.,
	    Galli,A., Castagna,A., Lazzarin,A., Clementi,M. and Gianotti,N.
  TITLE     Dynamic patterns of human immunodeficiency virus type 1 integrase
	    gene evolution in patients failing raltegravir-based salvage
	    therapies.
  JOURNAL   AIDS. 23(4); 455-60 (2009)
  PUBMED    19165083
REFERENCE   2 (bases 1 to 839)
            Show all sequences for reference 2
  AUTHORS   Canducci,F., Sampaolo,M., Marinozzi,M.C., Boeri,E. and Clementi,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-JUL-2008) Laboratory of Microbiology and Virology,
	    University Vita-salute San Raffaele, via Olgettina 58, Milan 20132,
	    Italy
FEATURES             Location/Qualifiers
     source	     1..839
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="pt6w20"
		     /db_xref="taxon:11676"
		     /country="Italy"
		     /collection_date="Dec-2007"
     gene	     <1..>839
		     /gene="pol"
     CDS	     <1..>839
		     /gene="pol"
		     /codon_start="1"
		     /transl_table="1"
		     /product="integrase"
		     /protein_id="ACH99141.1"
		     /db_xref="GI:204304589"
		     /translation="VDKLVSNGIRRVLFLDGIDKAQEEHEKYHSNWRAMASDFNLPPV
		     VAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKIILVAVHVASGYIEAEVI
		     PAETGQEAAYFILKLAGRWPVKTIHTDNGRNFTSTTVKAACWWAGIKQAFGIPKNPQS
		     QGVVESMNNELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIVDIIA
		     TDLQTKELQKQITKIQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRR
		     KAK"
BASE COUNT	327 a	 130 c	  202 g    180 t
ORIGIN
       1 gtagataaat tagtcagtaa tgggatcagg agagtactat ttttagatgg aatagataaa 
      61 gcccaagaag aacatgagaa atatcacagt aattggagag caatggctag tgattttaac 
     121 ctgccacctg tggtagcaaa agagatagta gccagctgtg ataaatgtca gctaaaagga 
     181 gaagccatgc atggacaagt agactgtagt ccaggaatat ggcaactaga ttgtacacat 
     241 ctagaaggaa aaattatcct ggtagcagtt catgtagcca gtggatatat agaagcagaa 
     301 gttattccag cagaaacagg gcaggaagca gcatacttta tcttaaagtt agcaggaaga 
     361 tggccagtaa aaacaataca tacagacaat ggccgcaatt tcaccagtac tactgttaag 
     421 gccgcctgtt ggtgggcggg gatcaagcag gcatttggca ttcccaaaaa tccccaaagt 
     481 caaggagtag tagaatccat gaataatgaa ttaaagaaaa ttataggaca ggtaagagat 
     541 caggctgaac atcttaagac agcagtacag atggcagttt tcatccacaa ttttaaaaga 
     601 aaagggggga ttggggggta cagtgcaggg gaaagaatag tagacataat agcaacagac 
     661 ctacaaacta aggaactaca aaaacaaatt acaaaaattc aaaattttcg ggtttattac 
     721 agggacagca gagatccact ttggaaagga ccagcaaaac ttctttggaa aggtgaaggg 
     781 gcagtagtaa tacaagataa tagtgacata aaagtagtac caagaagaaa agcaaagat
//
last modified: Tue May 31 10:56 2022


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