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LOCUS	    EU863436		    2541 bp    RNA     linear	VRL 18-AUG-2008
DEFINITION  HIV-1 isolate 541-18-0 from South Africa envelope glycoprotein
	    (env) gene, partial cds
ACCESSION   EU863436
VERSION     EU863436.1 GI:196051373
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 2541)
            Show all sequences for reference 1
  AUTHORS   Rademeyer,C., Moore,P.L., Taylor,N., Martin,D.P., Choge,I.A.,
	    Gray,E.S., Sheppard,H.W., Gray,C., Morris,L. and Williamson,C.
  TITLE     Genetic characteristics of HIV-1 subtype C envelopes inducing
	    cross-neutralizing antibodies.
  JOURNAL   Virology. 368(1); 172-81 (2007)
  PUBMED    17632196
REFERENCE   2 (bases 1 to 2541)
            Show all sequences for reference 2
  AUTHORS   Rademeyer,C., Moore,P. and Williamson,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-JUL-2008) Medical Virology, University of Cape Town,
	    S3.25 Wehner Beit South, Anzio Road, Observatory, Cape Town,
	    Western Cape 7925, South Africa
FEATURES             Location/Qualifiers
     source	     1..2541
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="541-18-0"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="South Africa"
		     /collection_date="2000"
		     /note="subtype: C"
     gene	     <1..2541
		     /gene="env"
     CDS	     <1..2541
		     /gene="env"
		     /note="gp160"
		     /codon_start="1"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="ACG68841.1"
		     /db_xref="GI:196051374"
		     /translation="WGIWGILGFWICNVVGNLWVTVYYGVPVWEEANTTLFCASDAKA
		     YEREVHNVWATHACVPTDPDPQELVLENVTENFNMWKNDMVNQMHEDIISIWDQSLKP
		     CVKLTPLCVTLXCTNVNKNSTTADNNSTVTNDTKIKNCSFKVPTEITDKMHKELALYY
		     DLDVIPLKADGNSNNGEGSSNDSYRLINCNTSVIKQACPKVSFDPIPIHYCAPAGYAI
		     LKCNNKTFNGTGPCNNVSTVQCTHGIKPVVSTQLLLNGSLAEGEIIIRSKNMSDNVQT
		     IIVHLNEXVKIECARPNNNTRKSIRIGPGQTFYATGDIIGDIRKAHCNISESKWNKTL
		     QGVVEKLRKHFPNKTIKFSQSSGGDLEITRHSFNCRGEFFYCDTSKLFNSTFQPNSTK
		     NDTTITLQCRIKQIINMWQEVGRAIYAPPIAGNITCISNITGLLLTRDGGNETGNTEI
		     FRPGGGDMKDNWRSELYKYKVVKIKPLGVAPTKAKRRVVEREKRAVGIGAVLLGFLGA
		     AGSTMGAASITLTVQARQVLSGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQARVLAI
		     ERYLKDQQLLGLWGCSGKLICTTTVPWNSSWSNKSQTDIWDNMTWMQWDKEINNYTNT
		     IYKLLEDSQTQQEQNEKDLLALDSWNNLWNWFSITKWLWYIKLFIMIVGGLIGLRIIF
		     AVLSIVNRVRQGYSPLSFQTLTPNQWGPDRLGRIAEEGGEQDRDRSVRLVSGFLAIAW
		     DDLRNLCLFCYRLLRDFILIAARAAELLGRSSLRGLQRGWEALKYLGSLVQYWGLELK
		     KSAISLFNAIAIAVAEGTDRIIELIQNICRGIYNIPRRIRQGFEAALQ"
BASE COUNT	893 a	 435 c	  593 g    617 t      3 other
ORIGIN
       1 tgggggatat ggggcatctt aggcttttgg atttgtaatg tggtagggaa cttgtgggtc 
      61 acagtttatt atggagtacc tgtgtgggaa gaggcaaaca ccactctctt ctgtgcatca 
     121 gatgctaaag catatgagag agaagtgcat aatgtatggg ccacacatgc ctgtgtaccc 
     181 acagaccccg acccacaaga attagttttg gaaaatgtaa cagaaaattt taacatgtgg 
     241 aaaaatgaca tggtgaatca gatgcatgag gatataatca gtatatggga tcaaagccta 
     301 aagccatgtg taaagttgac cccactctgt gtcactttaa mctgtacaaa tgttaacaaa 
     361 aatagtacta ctgccgacaa taatagtact gttaccaatg atacwaaaat aaaaaattgc 
     421 tctttcaagg tacccacaga gataacagat aagatgcata aggagcttgc actttattat 
     481 gatcttgatg ttataccact taaggcggat ggcaatagta ataacgggga ggggagtagt 
     541 aatgacagct atagattaat aaattgtaat acctcagtca taaaacaagc ctgtccaaag 
     601 gtctcttttg acccaattcc tatacattat tgtgctccag ctggttatgc gattctaaag 
     661 tgtaataata agacattcaa tggaacagga ccttgcaata atgtcagcac agtacaatgt 
     721 acacatggaa ttaagccagt ggtatcaact cagctactgt taaatggtag cctagcagaa 
     781 ggagagataa taatcaggtc taaaaacatg tcagacaatg tccaaacaat aatagtacat 
     841 cttaatgaay ctgtaaaaat tgagtgtgca agacccaaca ataatacaag aaaaagtata 
     901 aggataggac caggacagac attctatgca acaggagaca taataggaga cataagaaaa 
     961 gcacattgta acattagtga aagtaaatgg aataaaactt tacaaggagt agttgaaaaa 
    1021 ttaagaaaac actttcctaa taaaacaata aaatttagtc aatcctcagg aggggaccta 
    1081 gaaattacaa ggcatagttt taattgtaga ggagaatttt tctattgcga tacatcaaaa 
    1141 ctgtttaata gtacattcca gcctaatagt acaaaaaatg atacaaccat cacactccaa 
    1201 tgcagaataa agcaaattat aaacatgtgg caggaggtag gacgagcaat atacgcccct 
    1261 cccattgcag gaaacataac atgtatatca aatatcacag gactactatt gacacgtgat 
    1321 ggaggaaatg aaacaggtaa cacagagata ttcagacctg gaggaggaga tatgaaggac 
    1381 aattggagaa gtgaattata taaatataaa gtggtaaaaa ttaagccatt aggagtagca 
    1441 cccactaagg caaaaaggag agtggtggag agagaaaaaa gagcagtggg aataggagct 
    1501 gtactccttg ggttcttggg agcagccgga agcactatgg gcgcggcgtc aataacgctg 
    1561 acggtacagg ccagacaagt attgtctggt atagtgcaac agcaaagcaa tttgctgagg 
    1621 gctatagagg cgcaacagca tatgttgcaa ctcacagtct ggggcattaa gcagctccag 
    1681 gcaagagtcc tggctataga aagataccta aaggatcaac agctcctagg gctttggggc 
    1741 tgctctggaa aactcatctg caccactacc gtgccttgga actccagttg gagtaataaa 
    1801 tctcaaacag atatttggga taacatgacc tggatgcagt gggataaaga gattaataac 
    1861 tacacaaaca caatatacaa gttgcttgaa gactcgcaaa cccagcagga acaaaatgaa 
    1921 aaagatttat tagcattgga cagttggaac aatctgtgga attggtttag cataacaaag 
    1981 tggctgtggt atataaaatt attcataatg atagtaggag gcttgatagg tttaagaata 
    2041 atttttgctg tgctttctat agtgaataga gttaggcagg gatactcacc tctgtcgttt 
    2101 cagaccctta ccccgaacca gtggggaccc gacaggctcg gaagaatcgc agaagaaggt 
    2161 ggagagcaag acagagacag atctgtgcgc ttagtgagcg gattcttagc tattgcctgg 
    2221 gacgatctgc ggaacctgtg cctcttctgc taccgcctat tgagagactt catattgatt 
    2281 gcagcgaggg cggcggaact tctgggacgc agcagtctca ggggactaca gagggggtgg 
    2341 gaagccctta agtatttggg aagtcttgtg cagtattggg gtctggaact aaaaaagagt 
    2401 gctattagtc tgtttaatgc catagcaata gcagtagctg aaggaacaga taggattata 
    2461 gaattaatac aaaatatttg tagaggtatc tacaacatac ccagaagaat aagacaggga 
    2521 tttgaagcag ctttgcagta a
//
last modified: Tue May 31 10:56 2022


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