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LOCUS EU863420 2505 bp RNA linear VRL 18-AUG-2008
DEFINITION HIV-1 isolate 525-32-7 from South Africa envelope glycoprotein
(env) gene, partial cds
ACCESSION EU863420
VERSION EU863420.1 GI:196051342
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 2505)
Show all sequences for reference 1
AUTHORS Rademeyer,C., Moore,P.L., Taylor,N., Martin,D.P., Choge,I.A.,
Gray,E.S., Sheppard,H.W., Gray,C., Morris,L. and Williamson,C.
TITLE Genetic characteristics of HIV-1 subtype C envelopes inducing
cross-neutralizing antibodies.
JOURNAL Virology. 368(1); 172-81 (2007)
PUBMED 17632196
REFERENCE 2 (bases 1 to 2505)
Show all sequences for reference 2
AUTHORS Rademeyer,C., Moore,P. and Williamson,C.
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2008) Medical Virology, University of Cape Town,
S3.25 Wehner Beit South, Anzio Road, Observatory, Cape Town,
Western Cape 7925, South Africa
FEATURES Location/Qualifiers
source 1..2505
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="525-32-7"
/host="Homo sapiens"
/db_xref="taxon:11676"
/country="South Africa"
/collection_date="2000"
/note="subtype: C"
gene <1..2505
/gene="env"
CDS <1..2505
/gene="env"
/note="gp160"
/codon_start="1"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="ACG68826.1"
/db_xref="GI:196051343"
/translation="WWIWGILGFWICNVTGLWVTVYYGVPGWKEAKTTLFCASDAKAY
EKEVHNVWATHACVPTDPNPQEMVLGNVTENFNMWKNDMVDQMHEDIISLWDQSLKPC
VKLTPLCVTLNCTNATATNANINNTVVDGMQNCSFNATTEIRDKQKKEYALFYRLDIV
PLSSNPNQSSXYSEYRLINCNTSTIAQACPKVTFDPIPIHYCAPAGFAILKCNNKTFN
GTGPCSNVSTVQCTHGIKPVVSTQLLLNGSLSEEGIIIRSENLTNNAKNIIVQFNESV
TINCTRPGNNTRKSVRIGPGQTFYATGDIIGNIRQAHCDISRDEWNKTLQRVKEKLRE
HFPGKNITFNSSSGGDLEITTHSFNCRGEFFYCNTSKLFNETELVNGTNSTYITLPCX
IKXIGHVAGCRTSDTMSPPPAAGITCNSTITGLILTRDGGNSSTETFRPTGGDMRDNW
RSELYKYKVVEIKPLGIAPTNAKRRVVERQKRAVGIGAMFLGILTAAGSTMGAASITL
TVQARHLLSGIVQQQSNLLRAIEAQQHLLQLTVWGIKQLQARVLAIERYLKDQQLLGM
WGCSGKRICTTNVIWNSSWSNRTYNEIWDNMTWMQWDREISNYTDTIYRLLEDSQSQQ
ENNEKDLLALDSWNNLWNWFDISRWLWYIKIFIMIVGGLIGLRIIFAVLSIANRVRQG
YSPLSFQTLIPHPRGPDRLGGIEEEGGEQDRDRSTRLVSGFLTLVWDDLRSLCLFSYH
RLRDFILIAVRAVELLGRSILRGLQWGWETLKYLGSLIQYWGLELKKSAINLLDTTAI
AVAEGTDRIIEXIQRICRAIRNIPTRIRQGLEAALQ"
BASE COUNT 872 a 444 c 576 g 605 t 8 other
ORIGIN
1 tggtggatat ggggaatctt aggcttttgg atttgtaatg tgacgggctt gtgggtcaca
61 gtctactatg gggtacctgg gtggaaagaa gcaaaaacta ctctattttg tgcatcagat
121 gctaaagcat atgagaaaga agtgcataat gtctgggcta cwcatgcctg tgtacccaca
181 gaccccaatc cacaagagat ggttctggga aatgtaacag aaaatttcaa catgtggaaa
241 aatgacatgg tggatcagat gcatgaggat ataatcagtt tatgggatca aagcctcaag
301 ccatgtgtaa agttgacccc actctgtgtc actttaaact gtacaaatgc aactgcaaca
361 aatgcaaaca ttaacaatac agtagtcgat ggaatgcaaa attgctcttt caatgcaacc
421 acagaaataa gagataagca aaagaaagaa tatgctcttt tttatagact tgatatagta
481 ccacttagta gcaaccctaa tcagagtagc arttatagtg agtatagatt aataaattgt
541 aatacctcaa ccatagctca agcctgtcca aaggtcactt ttgacccaat tcctatacat
601 tattgtgctc cagccggttt tgcgattcta aagtgtaata ataagacatt caatggaaca
661 gggccatgca gtaatgtcag cacagtgcaa tgtacacatg gaattaagcc agtagtatca
721 actcaattac tattgaatgg cagcctatca gaagaaggga taataattag atctgaaaat
781 ctgacaaaca atgccaaaaa tataatagta cagtttaatg aatctgtaac aattaattgt
841 acaagaccag gcaataatac aagaaaaagt gtgaggatag gaccaggaca aacattctat
901 gcaacaggag acataatagg aaatataaga caagcacatt gtgacattag tagagatgaa
961 tggaataaaa ctctacaaag ggtaaaggaa aaactacggg aacacttccc tggtaaaaat
1021 ataacattta actcatcctc aggaggggac ctagaaatta caacacatag ctttaattgt
1081 agaggagaat ttttctattg caatacatca aagctgttta atgagacaga gctggttaat
1141 ggtacaaaca gtacttacat cacactccca tgywaaataa aacwmattgg tcatgtggca
1201 ggatgtagga cgagcgacac aatgtcccct ccccccgcag caggcatcac atgtaactca
1261 accatcacag gactaatatt gacacgtgat ggaggaaatt cgagtacaga aacattcaga
1321 ccyacaggag gagatatgag ggacaattgg agaagtgaat tatataaata taaagtggta
1381 gaaattaagc cattaggaat agcacccact aatgcaaaaa ggagagtggt ggagagacaa
1441 aaaagagcag tgggaatagg agctatgttc cttgggatct tgacagcagc aggaagcact
1501 atgggcgcag catcaataac gctgacggta caggccagac atttattgtc tggtatagtg
1561 caacagcaaa gcaatttgct gagggctata gaggcgcaac agcatctgtt gcaactcacg
1621 gtctggggca ttaagcagct ccaggcaaga gtcctggcta tagaaagata cctaaaggat
1681 caacagctcc tagggatgtg gggctgctct ggaaaacgca tctgcaccac taatgtgatt
1741 tggaactcta gttggagtaa tagaacttac aatgagattt gggataacat gacctggatg
1801 cagtgggata gagaaattag taattacaca gacacaatat acaggttact tgaagactcg
1861 caaagccagc aggaaaacaa tgaaaaagat ttactagcat tggacagttg gaacaatctg
1921 tggaattggt ttgacatatc aagatggctg tggtatataa aaatattcat aatgatagta
1981 ggaggcttga taggtttaag aataattttt gctgtgctct ctatagcgaa tagagttagg
2041 cagggatact cacctttgtc atttcagacc cttatcccac acccgagggg acccgacagg
2101 ctcggaggaa tcgaagaaga aggtggagag caagacagag acagatccac tcgattagtg
2161 agcggattct tgacacttgt ctgggacgat ctgcggagcc tgtgcctctt cagctaccac
2221 cgattgagag acttcatatt aattgcagtg agagcagtgg aacttctggg acgcagcatt
2281 ctcaggggac tacagtgggg gtgggagact cttaagtatt taggaagtct tatacaatat
2341 tggggtctag agctaaaaaa gagtgctatt aatctgcttg acaccacagc aatagcagta
2401 gctgaaggaa cagataggat tatagaattm atacaaagaa tttgtagagc tattcgcaat
2461 atccctacaa gaataagaca gggcttggaa gcagctttgc aataa
//
last modified: Tue May 31 10:56 2022