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LOCUS EU700609 933 bp DNA linear VRL 09-JUN-2008
DEFINITION HIV-1 clone Patient002_Time2_EFFECTOR_MEMORY_CLONE12 from Canada
envelope glycoprotein (env) gene, partial cds
ACCESSION EU700609
VERSION EU700609.1 GI:189344044
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 933)
Show all sequences for reference 1
AUTHORS Chomont,N., El-Far,M., Ancuta,P., Trautmann,L., Procopio,F.A.,
Yassine-Diab,B., Boucher,G., Boulassel,M.-R., Ghattas,G.,
Brenchley,J.M., Schacker,T.W., Hill,B.J., Douek,D.C., Routy,J.-P.,
Haddad,E.K. and Sekaly,R.-P.
TITLE HIV reservoir size and persistence are driven by T cell survival
and homeostatic proliferation.
JOURNAL Nat. Med.. 15(8); 893-900 (2009)
PUBMED 19543283
REFERENCE 2 (bases 1 to 933)
Show all sequences for reference 2
AUTHORS Chomont,N., El Far,M., Ancuta,P., Trautmann,L., Procopio,F.A.,
Yassine-Diab,B., Boucher,G., Boulassel,M.-R., Routy,J.-P.,
Haddad,E.K. and Sekaly,R.-P.
TITLE Direct Submission
JOURNAL Submitted (06-MAY-2008) Laboratoire d''Immunologie, Universite de
Montreal, 264, Rene Levesque Est, Montreal, Quebec H2X1P1, Canada
FEATURES Location/Qualifiers
source 1..933
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/host="Homo sapiens"
/db_xref="taxon:11676"
/clone="Patient002_Time2_EFFECTOR_MEMORY_CLONE12"
/country="Canada"
/collection_date="03-Mar-2006"
gene <1..>933
/gene="env"
/gene_synonym="gp120"
CDS <1..>933
/gene="env"
/gene_synonym="gp120"
/note="V1-V3 region"
/codon_start="3"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="ACD92391.1"
/db_xref="GI:189344045"
/translation="ATHACVPTDPNPQEVVLGNVTENFNMWKNNMVEQMQEDIISLWD
QSLKPCVKLTPLCVTLNCTEVQKGTNNTNSSLGMMKEEMKNCSFNITTSIKDKMKKEY
ALFYSLDVVPIDRNNTRYRLINCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNNK
TFNGKGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEETVIRSSNFSDNAKTIIVQLN
NFVEINCTRPNDNTRKSIPMGPGKAFYATGDITGDIRQAHCNLSRGKWNNTLSTIVIK
LREQFGNKTIVFNQASGGDLEIVMHSFNCGGEFF"
BASE COUNT 358 a 157 c 187 g 231 t
ORIGIN
1 gggccacaca tgcctgtgta cccacagacc ccaacccaca agaagtagta ttgggaaatg
61 tgacagaaaa ttttaacatg tggaaaaata acatggtaga acagatgcag gaggatataa
121 tcagtttatg ggatcaaagc ctaaagccat gtgtaaaatt aaccccactc tgtgttactt
181 taaattgcac tgaggtgcag aaaggtacta ataacaccaa tagtagtttg ggaatgatga
241 aggaagaaat gaaaaactgc tctttcaata tcaccacaag cataaaagat aagatgaaga
301 aagaatatgc acttttttat agccttgatg tagtaccaat agatagaaat aataccagat
361 ataggttgat aaattgtaac acctcagtca ttacacaggc ctgtccaaag gtatcctttg
421 agccaattcc catacattat tgtgccccag ctggttttgc gattctaaag tgtaacaata
481 agacattcaa tggaaaagga ccatgtacaa atgtaagcac agtacaatgt acacatggaa
541 ttaggccagt agtgtcaact caactgctgt taaatggcag tctagcagaa gaagagacag
601 taattagatc cagcaatttc tcggacaatg ccaaaaccat aatagtacag ctcaataatt
661 ttgtagaaat taattgtaca agacccaacg acaatacaag aaagagtata cctatgggac
721 cagggaaagc attttatgca acaggagata taacaggaga tataagacaa gcacattgta
781 accttagtag aggaaaatgg aataacactt taagcacgat agttataaaa ttaagagaac
841 agtttgggaa taaaacaata gtctttaatc aagcctcagg aggggaccta gaaattgtaa
901 tgcacagttt taattgtgga ggggaatttt tct
//
last modified: Tue May 31 10:56 2022