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LOCUS EU700563 948 bp DNA linear VRL 09-JUN-2008
DEFINITION HIV-1 clone Patient002_Time2_NAIVE_CLONE2 from Canada envelope
glycoprotein (env) gene, partial cds
ACCESSION EU700563
VERSION EU700563.1 GI:189343952
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 948)
Show all sequences for reference 1
AUTHORS Chomont,N., El-Far,M., Ancuta,P., Trautmann,L., Procopio,F.A.,
Yassine-Diab,B., Boucher,G., Boulassel,M.-R., Ghattas,G.,
Brenchley,J.M., Schacker,T.W., Hill,B.J., Douek,D.C., Routy,J.-P.,
Haddad,E.K. and Sekaly,R.-P.
TITLE HIV reservoir size and persistence are driven by T cell survival
and homeostatic proliferation.
JOURNAL Nat. Med.. 15(8); 893-900 (2009)
PUBMED 19543283
REFERENCE 2 (bases 1 to 948)
Show all sequences for reference 2
AUTHORS Chomont,N., El Far,M., Ancuta,P., Trautmann,L., Procopio,F.A.,
Yassine-Diab,B., Boucher,G., Boulassel,M.-R., Routy,J.-P.,
Haddad,E.K. and Sekaly,R.-P.
TITLE Direct Submission
JOURNAL Submitted (06-MAY-2008) Laboratoire d''Immunologie, Universite de
Montreal, 264, Rene Levesque Est, Montreal, Quebec H2X1P1, Canada
FEATURES Location/Qualifiers
source 1..948
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/host="Homo sapiens"
/db_xref="taxon:11676"
/clone="Patient002_Time2_NAIVE_CLONE2"
/country="Canada"
/collection_date="03-Mar-2006"
gene <1..>948
/gene="env"
/gene_synonym="gp120"
CDS <1..>948
/gene="env"
/gene_synonym="gp120"
/note="V1-V3 region"
/codon_start="3"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="ACD92345.1"
/db_xref="GI:189343953"
/translation="ATHACVPTDPNPQEVVLGNVTENFNMWKNNMVEQMQEDIISLWD
QSLKPCVKLTPLCVTLSCTDWGNATSTNSSSEGRIERKINQGEIKNCSFNITTSIKDK
MKKEYALFYSLDVVPIDRNNTRYRLINCNTSVITQACPKVSFEPIPIHYCAPAGFAIL
KCNNKTFNGKGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEETVIRSSNFSDNAKTI
IVQLNNSVEINCARPNNNTRKSIPMGPGRAFYATGDIIGDIRQAHCNLSRKEWNNTLS
KIVIKLREQIGNKTIVFNQASGGDLEIVMHSFNCGGEFF"
BASE COUNT 368 a 157 c 192 g 231 t
ORIGIN
1 gggccacaca tgcctgtgta cccacagacc ccaacccaca agaagtagta ttgggaaatg
61 tgacagaaaa ttttaacatg tggaaaaata acatggtaga acagatgcag gaggatataa
121 tcagtttatg ggatcaaagc ctaaagccat gtgtaaaatt aaccccactc tgtgttactt
181 taagttgcac tgattgggga aatgctacta gtaccaatag tagtagtgag ggaaggatag
241 aaagaaaaat aaatcaggga gaaataaaaa actgctcttt caatatcacc acaagcataa
301 aagataagat gaagaaagaa tatgcacttt tttatagcct tgatgtagta ccaatagata
361 gaaataatac cagatatagg ttgataaatt gtaacacctc agtcattaca caggcctgtc
421 caaaggtatc ctttgagcca attcccatac attattgtgc cccagctggt tttgcgattc
481 taaagtgtaa caataagaca ttcaatggaa aaggaccatg tacaaatgta agcacagtac
541 aatgtacaca tggaattagg ccagtagtgt caactcaact gctgttaaat ggcagtctag
601 cagaagaaga gacagtaatt agatccagca atttctcgga caatgccaaa accataatag
661 tacagctcaa taattctgta gaaattaatt gtgcaagacc caacaacaat acaagaaaga
721 gtatacctat gggaccaggg agagcattct atgcaacagg agatataata ggagatataa
781 gacaagcaca ttgtaacctt agtagaaaag aatggaataa cactttaagc aagatagtta
841 taaaattaag agaacagatt gggaataaaa caatagtctt taatcaagcc tcaggagggg
901 acctagaaat tgtaatgcac agttttaatt gtggagggga atttttct
//
last modified: Tue May 31 10:56 2022