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LOCUS	    EU700563		     948 bp    DNA     linear	VRL 09-JUN-2008
DEFINITION  HIV-1 clone Patient002_Time2_NAIVE_CLONE2 from Canada envelope
	    glycoprotein (env) gene, partial cds
ACCESSION   EU700563
VERSION     EU700563.1 GI:189343952
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 948)
            Show all sequences for reference 1
  AUTHORS   Chomont,N., El-Far,M., Ancuta,P., Trautmann,L., Procopio,F.A.,
	    Yassine-Diab,B., Boucher,G., Boulassel,M.-R., Ghattas,G.,
	    Brenchley,J.M., Schacker,T.W., Hill,B.J., Douek,D.C., Routy,J.-P.,
	    Haddad,E.K. and Sekaly,R.-P.
  TITLE     HIV reservoir size and persistence are driven by T cell survival
	    and homeostatic proliferation.
  JOURNAL   Nat. Med.. 15(8); 893-900 (2009)
  PUBMED    19543283
REFERENCE   2 (bases 1 to 948)
            Show all sequences for reference 2
  AUTHORS   Chomont,N., El Far,M., Ancuta,P., Trautmann,L., Procopio,F.A.,
	    Yassine-Diab,B., Boucher,G., Boulassel,M.-R., Routy,J.-P.,
	    Haddad,E.K. and Sekaly,R.-P.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-MAY-2008) Laboratoire d''Immunologie, Universite de
	    Montreal, 264, Rene Levesque Est, Montreal, Quebec H2X1P1, Canada
FEATURES             Location/Qualifiers
     source	     1..948
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /clone="Patient002_Time2_NAIVE_CLONE2"
		     /country="Canada"
		     /collection_date="03-Mar-2006"
     gene	     <1..>948
		     /gene="env"
		     /gene_synonym="gp120"
     CDS	     <1..>948
		     /gene="env"
		     /gene_synonym="gp120"
		     /note="V1-V3 region"
		     /codon_start="3"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="ACD92345.1"
		     /db_xref="GI:189343953"
		     /translation="ATHACVPTDPNPQEVVLGNVTENFNMWKNNMVEQMQEDIISLWD
		     QSLKPCVKLTPLCVTLSCTDWGNATSTNSSSEGRIERKINQGEIKNCSFNITTSIKDK
		     MKKEYALFYSLDVVPIDRNNTRYRLINCNTSVITQACPKVSFEPIPIHYCAPAGFAIL
		     KCNNKTFNGKGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEETVIRSSNFSDNAKTI
		     IVQLNNSVEINCARPNNNTRKSIPMGPGRAFYATGDIIGDIRQAHCNLSRKEWNNTLS
		     KIVIKLREQIGNKTIVFNQASGGDLEIVMHSFNCGGEFF"
BASE COUNT	368 a	 157 c	  192 g    231 t
ORIGIN
       1 gggccacaca tgcctgtgta cccacagacc ccaacccaca agaagtagta ttgggaaatg 
      61 tgacagaaaa ttttaacatg tggaaaaata acatggtaga acagatgcag gaggatataa 
     121 tcagtttatg ggatcaaagc ctaaagccat gtgtaaaatt aaccccactc tgtgttactt 
     181 taagttgcac tgattgggga aatgctacta gtaccaatag tagtagtgag ggaaggatag 
     241 aaagaaaaat aaatcaggga gaaataaaaa actgctcttt caatatcacc acaagcataa 
     301 aagataagat gaagaaagaa tatgcacttt tttatagcct tgatgtagta ccaatagata 
     361 gaaataatac cagatatagg ttgataaatt gtaacacctc agtcattaca caggcctgtc 
     421 caaaggtatc ctttgagcca attcccatac attattgtgc cccagctggt tttgcgattc 
     481 taaagtgtaa caataagaca ttcaatggaa aaggaccatg tacaaatgta agcacagtac 
     541 aatgtacaca tggaattagg ccagtagtgt caactcaact gctgttaaat ggcagtctag 
     601 cagaagaaga gacagtaatt agatccagca atttctcgga caatgccaaa accataatag 
     661 tacagctcaa taattctgta gaaattaatt gtgcaagacc caacaacaat acaagaaaga 
     721 gtatacctat gggaccaggg agagcattct atgcaacagg agatataata ggagatataa 
     781 gacaagcaca ttgtaacctt agtagaaaag aatggaataa cactttaagc aagatagtta 
     841 taaaattaag agaacagatt gggaataaaa caatagtctt taatcaagcc tcaggagggg 
     901 acctagaaat tgtaatgcac agttttaatt gtggagggga atttttct
//
last modified: Tue May 31 10:56 2022


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