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LOCUS EU700559 954 bp DNA linear VRL 09-JUN-2008
DEFINITION HIV-1 clone Patient002_Time1_EFFECTOR_MEMORY_CLONE10 from Canada
truncated envelope glycoprotein (env) gene, partial cds
ACCESSION EU700559
VERSION EU700559.1 GI:189343944
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 954)
Show all sequences for reference 1
AUTHORS Chomont,N., El-Far,M., Ancuta,P., Trautmann,L., Procopio,F.A.,
Yassine-Diab,B., Boucher,G., Boulassel,M.-R., Ghattas,G.,
Brenchley,J.M., Schacker,T.W., Hill,B.J., Douek,D.C., Routy,J.-P.,
Haddad,E.K. and Sekaly,R.-P.
TITLE HIV reservoir size and persistence are driven by T cell survival
and homeostatic proliferation.
JOURNAL Nat. Med.. 15(8); 893-900 (2009)
PUBMED 19543283
REFERENCE 2 (bases 1 to 954)
Show all sequences for reference 2
AUTHORS Chomont,N., El Far,M., Ancuta,P., Trautmann,L., Procopio,F.A.,
Yassine-Diab,B., Boucher,G., Boulassel,M.-R., Routy,J.-P.,
Haddad,E.K. and Sekaly,R.-P.
TITLE Direct Submission
JOURNAL Submitted (06-MAY-2008) Laboratoire d''Immunologie, Universite de
Montreal, 264, Rene Levesque Est, Montreal, Quebec H2X1P1, Canada
FEATURES Location/Qualifiers
source 1..954
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/host="Homo sapiens"
/db_xref="taxon:11676"
/clone="Patient002_Time1_EFFECTOR_MEMORY_CLONE10"
/country="Canada"
/collection_date="21-Jan-2005"
gene <1..200
/gene="env"
/gene_synonym="gp120"
CDS <1..200
/gene="env"
/gene_synonym="gp120"
/note="V1-V3 region"
/codon_start="3"
/transl_table="1"
/product="truncated envelope glycoprotein"
/protein_id="ACD92341.1"
/db_xref="GI:189343945"
/translation="ATHACVPTDPNPQEVVLGNVTENFNMWKNNMVEQMQEDIISLWD
QSLKPCVKLTPLCVTLNCTEV"
BASE COUNT 368 a 159 c 189 g 238 t
ORIGIN
1 gggccacaca tgcctgtgta cccacagacc ccaacccaca ggaagtagta ttgggaaatg
61 tgacagaaaa ttttaacatg tggaaaaata acatggtaga acagatgcag gaggatataa
121 tcagtttatg ggatcaaagc ctaaagccat gtgtaaaatt aaccccactc tgtgttactt
181 taaattgcac tgaggtgtag aaaggtacta ataacaccaa tagtagtttg ggaatgatga
241 aggaagaaat gaaaaactgc tctttcaata tcaccacaag cataaaagat aaggtgaaga
301 aagaatatgc acttttttat agacttgatg tagtaccaat agataatgat aataataata
361 ctactaaaaa ctataccaat tataggttga taaattgtaa tacctcagtc attacacaag
421 cctgtccaaa ggtctccttt gagccaattc ccatacatta ttgtgcccca gccggttttg
481 cgattctaaa gtgtaacaat aagacattca atggaaaagg accatgtaca aatgtaagca
541 cagtacaatg tacacatgga attaggccag tagtgtcaac tcaactgctg ttaaatggca
601 gtctagcaga agaagagaca gtaattagat ccagcaattt ctcggacaat gccaaaacca
661 taatagtaca gctcaataat tttgtagaaa ttaattgtac aggacccaac gacaatacaa
721 gaaagagtat acctatggga ccagggaaag cattttatgc aacaggagat ataacaggag
781 atataagaca agcacattgt aaccttagta gaggaaaatg gaataacact ttaagcaaga
841 tagttataaa attaagagaa cagtttggga ataaaacaat agtctttaag caagcctcag
901 gaggggaccc agaaattgta atgcacagtt ttaattgtgg aggggaattt ttct
//
last modified: Tue May 31 10:56 2022