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LOCUS EU700529 969 bp DNA linear VRL 09-JUN-2008
DEFINITION HIV-1 clone Patient002_Time1_CENTRAL_MEMORY_CLONE4 from Canada
envelope glycoprotein (env) gene, partial cds
ACCESSION EU700529
VERSION EU700529.1 GI:189343884
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 969)
Show all sequences for reference 1
AUTHORS Chomont,N., El-Far,M., Ancuta,P., Trautmann,L., Procopio,F.A.,
Yassine-Diab,B., Boucher,G., Boulassel,M.-R., Ghattas,G.,
Brenchley,J.M., Schacker,T.W., Hill,B.J., Douek,D.C., Routy,J.-P.,
Haddad,E.K. and Sekaly,R.-P.
TITLE HIV reservoir size and persistence are driven by T cell survival
and homeostatic proliferation.
JOURNAL Nat. Med.. 15(8); 893-900 (2009)
PUBMED 19543283
REFERENCE 2 (bases 1 to 969)
Show all sequences for reference 2
AUTHORS Chomont,N., El Far,M., Ancuta,P., Trautmann,L., Procopio,F.A.,
Yassine-Diab,B., Boucher,G., Boulassel,M.-R., Routy,J.-P.,
Haddad,E.K. and Sekaly,R.-P.
TITLE Direct Submission
JOURNAL Submitted (06-MAY-2008) Laboratoire d''Immunologie, Universite de
Montreal, 264, Rene Levesque Est, Montreal, Quebec H2X1P1, Canada
FEATURES Location/Qualifiers
source 1..969
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/host="Homo sapiens"
/db_xref="taxon:11676"
/clone="Patient002_Time1_CENTRAL_MEMORY_CLONE4"
/country="Canada"
/collection_date="21-Jan-2005"
gene <1..>969
/gene="env"
/gene_synonym="gp120"
CDS <1..>969
/gene="env"
/gene_synonym="gp120"
/note="V1-V3 region"
/codon_start="3"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="ACD92311.1"
/db_xref="GI:189343885"
/translation="ATHACVPTDPNPQEVVLGNVTENFNMWKNNMVEQMQEDIISLWD
QSLKPCVKLTPLCVTLNCTDWGNATSTNNSSEGNIEGKINQGEMKNCSFNITTSIKDK
MKKEYALFYSLDVVPIDNDNNNTTKNYTNYRLINCNTSVITQACPKVSFEPIPIHYCA
PAGFAILKCNNKTFNGKGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEKIVIRSSNF
SDNAKTIIVQLNNSVEINCTRPNNKTRKSIPMGPGRAFYATGDIIGDIRQAHCNLSRK
EWNNTLSKIVIKLREQFGNKTIVFKQASGGDPEIVMHSFNCGGEFF"
BASE COUNT 381 a 159 c 189 g 240 t
ORIGIN
1 gggccacaca tgcctgtgta cccacagacc ccaacccaca agaagtagta ttgggaaatg
61 tgacagaaaa ttttaacatg tggaaaaata acatggtaga acagatgcag gaggatataa
121 tcagtttatg ggatcaaagc ctaaaaccat gtgtaaaatt aaccccactc tgtgttactt
181 taaattgcac tgattgggga aatgctacta gtaccaataa tagtagtgag ggaaacatag
241 aaggaaaaat aaatcaggga gaaatgaaaa actgctcttt caatatcacc acaagcataa
301 aagataagat gaagaaagaa tatgcacttt tttatagcct tgatgtagta ccaatagata
361 atgataataa taatactact aaaaactata ccaattatag gttgataaat tgtaatacct
421 cagtcattac acaagcctgt ccaaaggtat cctttgagcc aattcccata cattattgtg
481 ccccagctgg ttttgcgatt ctaaagtgta acaataagac attcaatgga aagggaccat
541 gtacgaatgt aagcacagta caatgtacac atggaattag gccagtagtg tcaactcaac
601 tgctgttaaa tggcagtcta gcagaagaaa agatagtaat tagatccagc aatttctcgg
661 acaatgccaa aaccataata gtacagctca ataattctgt agaaattaat tgtacaagac
721 ccaacaacaa gacaagaaag agtataccta tgggaccagg gagagcattt tatgcaacag
781 gagatataat aggagatata agacaagcac attgtaacct tagtagaaaa gaatggaata
841 acactttaag caagatagtt ataaaattaa gagaacagtt tgggaataaa acaatagtct
901 ttaagcaagc ctcaggaggg gacccagaaa ttgtaatgca cagttttaat tgtggagggg
961 aatttttct
//
last modified: Tue May 31 10:56 2022