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LOCUS EU693657 1212 bp RNA linear VRL 02-JUN-2008
DEFINITION HIV-1 isolate 129 from USA pol protein (pol) gene, partial cds
ACCESSION EU693657
VERSION EU693657.1 GI:189096860
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 1212)
Show all sequences for reference 1
AUTHORS Little,S.J., Holte,S., Routy,J.P., Daar,E.S., Markowitz,M.,
Collier,A.C., Koup,R.A., Mellors,J.W., Connick,E., Conway,B.,
Kilby,M., Wang,L., Whitcomb,J.M., Hellmann,N.S. and Richman,D.D.
TITLE Antiretroviral-drug resistance among patients recently infected
with HIV
JOURNAL N. Engl. J. Med. 347 (6), 385-394 (2002)
PUBMED 12167680
REFERENCE 2 (bases 1 to 1212)
Show all sequences for reference 2
AUTHORS Little,S.J., Holte,S. and Richman,D.D.
TITLE Direct Submission
JOURNAL Submitted (05-MAY-2008) Medicine and Pathology, University of
California, San Diego, UCSD Antiviral Research Center, 150 W.
Washington St., San Diego, CA 92103, USA
FEATURES Location/Qualifiers
source 1..1212
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="129"
/isolation_source="acutely-infected patient"
/db_xref="taxon:11676"
/country="USA"
/collection_date="1997"
gene <1..>1212
/gene="pol"
CDS <1..>1212
/gene="pol"
/codon_start="1"
/transl_table="1"
/product="pol protein"
/protein_id="ACD76197.1"
/db_xref="GI:189096861"
/translation="PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEDMNLPGRWKP
KMIGGIGGFIKVRQYDQIPIXICGHXAXGTVLXGPTPVNIIGRNLLTQIGCTLNFPIS
PIXTVPVXLKPGMDGPKVKQWPLTEEKIKALVEICXEMEKEGKISKIGPENXYNTPXF
AIXKKDSTKWRKLVDFRELNKXTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
LDKEFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKXLEPFRKQNPD
IVIYQYMDDLYVGSDLEIGQHRIKIEELRQHLLRWGFTTPDKKHQKEPPFLWMGYELH
PDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYAGIKVXQLCKLLRGXKXLTEVX
XLTEEAELELAE"
BASE COUNT 461 a 191 c 248 g 279 t 33 other
ORIGIN
1 cctcagatca ctctttggca acgaccccta gtcacaataa agataggggg gcaactaaaa
61 gaagctctat tagatacagg agcagatgat acagtattag aagacatgaa yttgccagga
121 agatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acagtatgat
181 cagataccca tagawatctg tggacatara gctrtaggta cagtattart aggacctaca
241 cctgtcaaca taattggaag aaatctgttg actcarattg gttgcacttt aaattttccy
301 attagtccta ttgamactgt accagtaara ttaaagccag gaatggatgg cccaaaagtt
361 aaacaatggc cattgacaga agaaaaaata aaagcaytag tagaaatttg trcagaaatg
421 gaaaaggaag graaaatttc aaaaattggg cctgaaaaty catacaatac tccartattt
481 gccataarga aaaaagayag tactaartgg agaaaattag tagatttcag rgaacttaat
541 aagaraactc aagacttctg ggaagttcaa ttagggatac cacatcccgc agggttaaaa
601 aagaagaaat cagtgacagt actggatgtg ggtgatgcat atttttcagt tcctttagat
661 aaagagttta ggaagtatac tgcatttacc atacctagta taaacaatga gacaccaggg
721 attagatatc agtacaatgt gctcccacag ggatggaaag gatcaccagc aatattccaa
781 agtagcatga caaaartctt agagcctttt agaaaacaaa atccagacat agttatctat
841 caatacatgg atgatttgta tgtaggatct gacttagaaa tagggcagca tagaataaaa
901 atagaggaac tgagacaaca tctgttaagg tggggattta ccacaccaga caaaaaacat
961 cagaaagaac ctccattcct ttggatgggt tatgaactcc atcckgataa atggacagta
1021 cagcctatag tgctgccaga aaargacagc tggactgtca atgacataca gaagttagtr
1081 ggaaaattga attgggcaag tcagatttay gcaggratta aagtaarrca attatgtaaa
1141 ctcctyaggg garcyaaakc actaacagaa gtartacmtc taacagaaga agcagagcta
1201 gaactggcag aa
//
last modified: Tue May 31 10:56 2022