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LOCUS	    EU693657		    1212 bp    RNA     linear	VRL 02-JUN-2008
DEFINITION  HIV-1 isolate 129 from USA pol protein (pol) gene, partial cds
ACCESSION   EU693657
VERSION     EU693657.1 GI:189096860
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 1212)
            Show all sequences for reference 1
  AUTHORS   Little,S.J., Holte,S., Routy,J.P., Daar,E.S., Markowitz,M.,
	    Collier,A.C., Koup,R.A., Mellors,J.W., Connick,E., Conway,B.,
	    Kilby,M., Wang,L., Whitcomb,J.M., Hellmann,N.S. and Richman,D.D.
  TITLE     Antiretroviral-drug resistance among patients recently infected
	    with HIV
  JOURNAL   N. Engl. J. Med. 347 (6), 385-394 (2002)
  PUBMED    12167680
REFERENCE   2 (bases 1 to 1212)
            Show all sequences for reference 2
  AUTHORS   Little,S.J., Holte,S. and Richman,D.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-MAY-2008) Medicine and Pathology, University of
	    California, San Diego, UCSD Antiviral Research Center, 150 W.
	    Washington St., San Diego, CA 92103, USA
FEATURES             Location/Qualifiers
     source	     1..1212
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="129"
		     /isolation_source="acutely-infected patient"
		     /db_xref="taxon:11676"
		     /country="USA"
		     /collection_date="1997"
     gene	     <1..>1212
		     /gene="pol"
     CDS	     <1..>1212
		     /gene="pol"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="ACD76197.1"
		     /db_xref="GI:189096861"
		     /translation="PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEDMNLPGRWKP
		     KMIGGIGGFIKVRQYDQIPIXICGHXAXGTVLXGPTPVNIIGRNLLTQIGCTLNFPIS
		     PIXTVPVXLKPGMDGPKVKQWPLTEEKIKALVEICXEMEKEGKISKIGPENXYNTPXF
		     AIXKKDSTKWRKLVDFRELNKXTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
		     LDKEFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKXLEPFRKQNPD
		     IVIYQYMDDLYVGSDLEIGQHRIKIEELRQHLLRWGFTTPDKKHQKEPPFLWMGYELH
		     PDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYAGIKVXQLCKLLRGXKXLTEVX
		     XLTEEAELELAE"
BASE COUNT	461 a	 191 c	  248 g    279 t     33 other
ORIGIN
       1 cctcagatca ctctttggca acgaccccta gtcacaataa agataggggg gcaactaaaa 
      61 gaagctctat tagatacagg agcagatgat acagtattag aagacatgaa yttgccagga 
     121 agatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acagtatgat 
     181 cagataccca tagawatctg tggacatara gctrtaggta cagtattart aggacctaca 
     241 cctgtcaaca taattggaag aaatctgttg actcarattg gttgcacttt aaattttccy 
     301 attagtccta ttgamactgt accagtaara ttaaagccag gaatggatgg cccaaaagtt 
     361 aaacaatggc cattgacaga agaaaaaata aaagcaytag tagaaatttg trcagaaatg 
     421 gaaaaggaag graaaatttc aaaaattggg cctgaaaaty catacaatac tccartattt 
     481 gccataarga aaaaagayag tactaartgg agaaaattag tagatttcag rgaacttaat 
     541 aagaraactc aagacttctg ggaagttcaa ttagggatac cacatcccgc agggttaaaa 
     601 aagaagaaat cagtgacagt actggatgtg ggtgatgcat atttttcagt tcctttagat 
     661 aaagagttta ggaagtatac tgcatttacc atacctagta taaacaatga gacaccaggg 
     721 attagatatc agtacaatgt gctcccacag ggatggaaag gatcaccagc aatattccaa 
     781 agtagcatga caaaartctt agagcctttt agaaaacaaa atccagacat agttatctat 
     841 caatacatgg atgatttgta tgtaggatct gacttagaaa tagggcagca tagaataaaa 
     901 atagaggaac tgagacaaca tctgttaagg tggggattta ccacaccaga caaaaaacat 
     961 cagaaagaac ctccattcct ttggatgggt tatgaactcc atcckgataa atggacagta 
    1021 cagcctatag tgctgccaga aaargacagc tggactgtca atgacataca gaagttagtr 
    1081 ggaaaattga attgggcaag tcagatttay gcaggratta aagtaarrca attatgtaaa 
    1141 ctcctyaggg garcyaaakc actaacagaa gtartacmtc taacagaaga agcagagcta 
    1201 gaactggcag aa
//
last modified: Tue May 31 10:56 2022


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