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LOCUS EU693654 1215 bp RNA linear VRL 02-JUN-2008
DEFINITION HIV-1 isolate 126 from USA pol protein (pol) gene, partial cds
ACCESSION EU693654
VERSION EU693654.1 GI:189096854
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 1215)
Show all sequences for reference 1
AUTHORS Little,S.J., Holte,S., Routy,J.P., Daar,E.S., Markowitz,M.,
Collier,A.C., Koup,R.A., Mellors,J.W., Connick,E., Conway,B.,
Kilby,M., Wang,L., Whitcomb,J.M., Hellmann,N.S. and Richman,D.D.
TITLE Antiretroviral-drug resistance among patients recently infected
with HIV
JOURNAL N. Engl. J. Med. 347 (6), 385-394 (2002)
PUBMED 12167680
REFERENCE 2 (bases 1 to 1215)
Show all sequences for reference 2
AUTHORS Little,S.J., Holte,S. and Richman,D.D.
TITLE Direct Submission
JOURNAL Submitted (05-MAY-2008) Medicine and Pathology, University of
California, San Diego, UCSD Antiviral Research Center, 150 W.
Washington St., San Diego, CA 92103, USA
FEATURES Location/Qualifiers
source 1..1215
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="126"
/isolation_source="acutely-infected patient"
/db_xref="taxon:11676"
/country="USA"
/collection_date="1997"
gene <1..>1215
/gene="pol"
CDS <1..>1215
/gene="pol"
/codon_start="1"
/transl_table="1"
/product="pol protein"
/protein_id="ACD76194.1"
/db_xref="GI:189096855"
/translation="PQITLWQRPIVTIKIGGQLKEALLDTGADDTVLEDMELPGRWKP
KMIGGIGGFIKVKQYDQITIEICGHKTIGTVLVGPTPVNIIGRNLLTQLGCTLNFPIS
PIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVF
AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
LDEDFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPE
IVIYQYMDDLYVGSDLEIGQHRTKIEELRRHLLKWGFTTPDKKHQKEPPFLWMGYELH
PDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYAGIKVKQLCKLLRGAKALTEVI
PLTKEAEIELAEN"
BASE COUNT 475 a 201 c 262 g 276 t 1 other
ORIGIN
1 cctcagatca ctctttggca acgacccatc gtcacaataa agataggggg gcaactaaag
61 gaagctctat tagatacagg agcagatgat acagtattag aagacatgga gttgccagga
121 agatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaaa acagtatgat
181 cagataacca tagaaatctg tggacataag actataggta cagtattagt aggacctaca
241 cctgtcaaca taattggaag aaayctgttg actcagcttg ggtgcacttt aaattttccc
301 attagtccta ttgaaactgt accagtaaaa ttaaagccag gaatggatgg cccaaaagtt
361 aaacaatggc cattgacaga agaaaaaata aaagcattag tagaaatttg tacagaaatg
421 gaaaaggaag ggaaaatttc aaaaattggg cctgaaaatc catacaatac tccagtattt
481 gccataaaga aaaaagacag taccaaatgg agaaaattag tagatttcag agaacttaat
541 aagagaactc aagacttctg ggaagttcaa ttaggaatac cacatcccgc agggttaaaa
601 aagaaaaaat cagtgacagt actggatgtg ggtgatgcat atttttcagt tcccttagat
661 gaagacttca ggaagtatac tgcatttacc atacctagta caaacaatga gacaccaggg
721 attagatatc agtacaatgt gcttccgcag ggatggaaag gatcaccagc aatattccaa
781 agtagcatga caaaaatctt agagcctttt agaaaacaaa atccagaaat agttatctat
841 cagtacatgg atgatttgta tgtaggatct gacttagaaa tagggcagca tagaacaaaa
901 atagaggaac tgagacgaca tctgttgaag tggggattta ccacacccga caaaaaacat
961 cagaaagaac ctccattcct ttggatgggt tatgaactcc atcctgataa atggacagta
1021 cagcctatag tgctgccaga aaaagatagc tggactgtca atgacataca gaagttagtg
1081 ggaaaattga attgggcaag tcagatttac gcaggaatta aggtaaagca attatgtaaa
1141 ctccttaggg gggccaaagc actaacagaa gtaataccac taacaaaaga agcagagata
1201 gaactggcag aaaac
//
last modified: Tue May 31 10:56 2022