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LOCUS	    EU693654		    1215 bp    RNA     linear	VRL 02-JUN-2008
DEFINITION  HIV-1 isolate 126 from USA pol protein (pol) gene, partial cds
ACCESSION   EU693654
VERSION     EU693654.1 GI:189096854
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 1215)
            Show all sequences for reference 1
  AUTHORS   Little,S.J., Holte,S., Routy,J.P., Daar,E.S., Markowitz,M.,
	    Collier,A.C., Koup,R.A., Mellors,J.W., Connick,E., Conway,B.,
	    Kilby,M., Wang,L., Whitcomb,J.M., Hellmann,N.S. and Richman,D.D.
  TITLE     Antiretroviral-drug resistance among patients recently infected
	    with HIV
  JOURNAL   N. Engl. J. Med. 347 (6), 385-394 (2002)
  PUBMED    12167680
REFERENCE   2 (bases 1 to 1215)
            Show all sequences for reference 2
  AUTHORS   Little,S.J., Holte,S. and Richman,D.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-MAY-2008) Medicine and Pathology, University of
	    California, San Diego, UCSD Antiviral Research Center, 150 W.
	    Washington St., San Diego, CA 92103, USA
FEATURES             Location/Qualifiers
     source	     1..1215
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="126"
		     /isolation_source="acutely-infected patient"
		     /db_xref="taxon:11676"
		     /country="USA"
		     /collection_date="1997"
     gene	     <1..>1215
		     /gene="pol"
     CDS	     <1..>1215
		     /gene="pol"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="ACD76194.1"
		     /db_xref="GI:189096855"
		     /translation="PQITLWQRPIVTIKIGGQLKEALLDTGADDTVLEDMELPGRWKP
		     KMIGGIGGFIKVKQYDQITIEICGHKTIGTVLVGPTPVNIIGRNLLTQLGCTLNFPIS
		     PIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVF
		     AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
		     LDEDFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPE
		     IVIYQYMDDLYVGSDLEIGQHRTKIEELRRHLLKWGFTTPDKKHQKEPPFLWMGYELH
		     PDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYAGIKVKQLCKLLRGAKALTEVI
		     PLTKEAEIELAEN"
BASE COUNT	475 a	 201 c	  262 g    276 t      1 other
ORIGIN
       1 cctcagatca ctctttggca acgacccatc gtcacaataa agataggggg gcaactaaag 
      61 gaagctctat tagatacagg agcagatgat acagtattag aagacatgga gttgccagga 
     121 agatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaaa acagtatgat 
     181 cagataacca tagaaatctg tggacataag actataggta cagtattagt aggacctaca 
     241 cctgtcaaca taattggaag aaayctgttg actcagcttg ggtgcacttt aaattttccc 
     301 attagtccta ttgaaactgt accagtaaaa ttaaagccag gaatggatgg cccaaaagtt 
     361 aaacaatggc cattgacaga agaaaaaata aaagcattag tagaaatttg tacagaaatg 
     421 gaaaaggaag ggaaaatttc aaaaattggg cctgaaaatc catacaatac tccagtattt 
     481 gccataaaga aaaaagacag taccaaatgg agaaaattag tagatttcag agaacttaat 
     541 aagagaactc aagacttctg ggaagttcaa ttaggaatac cacatcccgc agggttaaaa 
     601 aagaaaaaat cagtgacagt actggatgtg ggtgatgcat atttttcagt tcccttagat 
     661 gaagacttca ggaagtatac tgcatttacc atacctagta caaacaatga gacaccaggg 
     721 attagatatc agtacaatgt gcttccgcag ggatggaaag gatcaccagc aatattccaa 
     781 agtagcatga caaaaatctt agagcctttt agaaaacaaa atccagaaat agttatctat 
     841 cagtacatgg atgatttgta tgtaggatct gacttagaaa tagggcagca tagaacaaaa 
     901 atagaggaac tgagacgaca tctgttgaag tggggattta ccacacccga caaaaaacat 
     961 cagaaagaac ctccattcct ttggatgggt tatgaactcc atcctgataa atggacagta 
    1021 cagcctatag tgctgccaga aaaagatagc tggactgtca atgacataca gaagttagtg 
    1081 ggaaaattga attgggcaag tcagatttac gcaggaatta aggtaaagca attatgtaaa 
    1141 ctccttaggg gggccaaagc actaacagaa gtaataccac taacaaaaga agcagagata 
    1201 gaactggcag aaaac
//
last modified: Tue May 31 10:56 2022


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