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LOCUS	    EU693627		    1212 bp    RNA     linear	VRL 02-JUN-2008
DEFINITION  HIV-1 isolate 97 from USA pol protein (pol) gene, partial cds
ACCESSION   EU693627
VERSION     EU693627.1 GI:189096800
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 1212)
            Show all sequences for reference 1
  AUTHORS   Little,S.J., Holte,S., Routy,J.P., Daar,E.S., Markowitz,M.,
	    Collier,A.C., Koup,R.A., Mellors,J.W., Connick,E., Conway,B.,
	    Kilby,M., Wang,L., Whitcomb,J.M., Hellmann,N.S. and Richman,D.D.
  TITLE     Antiretroviral-drug resistance among patients recently infected
	    with HIV
  JOURNAL   N. Engl. J. Med. 347 (6), 385-394 (2002)
  PUBMED    12167680
REFERENCE   2 (bases 1 to 1212)
            Show all sequences for reference 2
  AUTHORS   Little,S.J., Holte,S. and Richman,D.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-MAY-2008) Medicine and Pathology, University of
	    California, San Diego, UCSD Antiviral Research Center, 150 W.
	    Washington St., San Diego, CA 92103, USA
FEATURES             Location/Qualifiers
     source	     1..1212
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="97"
		     /isolation_source="acutely-infected patient"
		     /db_xref="taxon:11676"
		     /country="USA"
		     /collection_date="1999"
     gene	     <1..>1212
		     /gene="pol"
     CDS	     <1..>1212
		     /gene="pol"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="ACD76167.1"
		     /db_xref="GI:189096801"
		     /translation="PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEINLPGRWKP
		     KMIGGIGGFIKVRQYDQIPIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPIS
		     PIETVPVKLKPGMDGPKVKQWPLTEEKIKALIEICTEMEKEGKISKIGPENPYNTPVF
		     AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
		     LDKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPD
		     IVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLKWGFTTPDKKHQKEPPFLWMGYELH
		     PDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYSGIKVKQLCKLIRGTKTLTEIV
		     PLTEEAELELAE"
BASE COUNT	479 a	 198 c	  253 g    282 t
ORIGIN
       1 cctcagatca ctctttggca acgacccctc gtcacaataa agataggggg acagctaaag 
      61 gaagctctat tagatacagg agcagatgat acagtattag aagaaataaa tttgccagga 
     121 agatggaagc caaaaatgat agggggaatt ggaggtttta tcaaagtaag acaatatgat 
     181 cagataccca tagaaatttg tggacataaa gctataggta cagtattagt aggacctacg 
     241 cctgtcaaca taattgggag aaatctgttg actcaaattg gctgcacttt aaattttccc 
     301 attagtccta ttgaaactgt accagtaaaa ttaaagccag gaatggatgg tccaaaagtt 
     361 aaacaatggc cattgacaga agaaaaaata aaagcattaa tagagatttg cacagaaatg 
     421 gaaaaggaag gaaaaatttc aaaaattggg cctgaaaatc catacaatac tccagtattt 
     481 gccataaaga aaaaggacag tactaaatgg agaaaattag tagatttcag agaacttaat 
     541 aagagaactc aagacttctg ggaagtccaa ttaggaatcc cacatcctgc aggtttaaag 
     601 aagaaaaagt cagtaacagt actggatgtg ggtgatgcat atttttcagt tcccttagat 
     661 aaagacttca ggaagtatac tgcattcacc atacctagta taaacaatga gacaccaggg 
     721 ataagatatc agtacaatgt gcttccacag ggatggaaag gatcaccagc aatattccaa 
     781 agtagcatga caaaaatctt agagcctttc agaaaacaaa atccagatat agttatctat 
     841 caatacatgg atgatttgta tgtaggatct gacttagaaa taggacagca tagaacaaaa 
     901 atagaggaac tgagacaaca tctgttgaag tggggattta ccacaccaga taaaaaacat 
     961 cagaaagaac ctccatttct ttggatgggt tatgaactcc atcctgataa atggacagta 
    1021 cagcctatag tgctgccaga aaaggacagc tggactgtca atgacataca gaagttagtg 
    1081 ggaaaattga attgggcaag tcaaatatat tcagggatta aagtaaagca attatgtaaa 
    1141 ctcattaggg gaaccaaaac actaacagaa atagtaccac taacagaaga ggcagagcta 
    1201 gaactggcag aa
//
last modified: Tue May 31 10:56 2022


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