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LOCUS EU693627 1212 bp RNA linear VRL 02-JUN-2008
DEFINITION HIV-1 isolate 97 from USA pol protein (pol) gene, partial cds
ACCESSION EU693627
VERSION EU693627.1 GI:189096800
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 1212)
Show all sequences for reference 1
AUTHORS Little,S.J., Holte,S., Routy,J.P., Daar,E.S., Markowitz,M.,
Collier,A.C., Koup,R.A., Mellors,J.W., Connick,E., Conway,B.,
Kilby,M., Wang,L., Whitcomb,J.M., Hellmann,N.S. and Richman,D.D.
TITLE Antiretroviral-drug resistance among patients recently infected
with HIV
JOURNAL N. Engl. J. Med. 347 (6), 385-394 (2002)
PUBMED 12167680
REFERENCE 2 (bases 1 to 1212)
Show all sequences for reference 2
AUTHORS Little,S.J., Holte,S. and Richman,D.D.
TITLE Direct Submission
JOURNAL Submitted (05-MAY-2008) Medicine and Pathology, University of
California, San Diego, UCSD Antiviral Research Center, 150 W.
Washington St., San Diego, CA 92103, USA
FEATURES Location/Qualifiers
source 1..1212
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="97"
/isolation_source="acutely-infected patient"
/db_xref="taxon:11676"
/country="USA"
/collection_date="1999"
gene <1..>1212
/gene="pol"
CDS <1..>1212
/gene="pol"
/codon_start="1"
/transl_table="1"
/product="pol protein"
/protein_id="ACD76167.1"
/db_xref="GI:189096801"
/translation="PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEINLPGRWKP
KMIGGIGGFIKVRQYDQIPIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPIS
PIETVPVKLKPGMDGPKVKQWPLTEEKIKALIEICTEMEKEGKISKIGPENPYNTPVF
AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
LDKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPD
IVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLKWGFTTPDKKHQKEPPFLWMGYELH
PDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYSGIKVKQLCKLIRGTKTLTEIV
PLTEEAELELAE"
BASE COUNT 479 a 198 c 253 g 282 t
ORIGIN
1 cctcagatca ctctttggca acgacccctc gtcacaataa agataggggg acagctaaag
61 gaagctctat tagatacagg agcagatgat acagtattag aagaaataaa tttgccagga
121 agatggaagc caaaaatgat agggggaatt ggaggtttta tcaaagtaag acaatatgat
181 cagataccca tagaaatttg tggacataaa gctataggta cagtattagt aggacctacg
241 cctgtcaaca taattgggag aaatctgttg actcaaattg gctgcacttt aaattttccc
301 attagtccta ttgaaactgt accagtaaaa ttaaagccag gaatggatgg tccaaaagtt
361 aaacaatggc cattgacaga agaaaaaata aaagcattaa tagagatttg cacagaaatg
421 gaaaaggaag gaaaaatttc aaaaattggg cctgaaaatc catacaatac tccagtattt
481 gccataaaga aaaaggacag tactaaatgg agaaaattag tagatttcag agaacttaat
541 aagagaactc aagacttctg ggaagtccaa ttaggaatcc cacatcctgc aggtttaaag
601 aagaaaaagt cagtaacagt actggatgtg ggtgatgcat atttttcagt tcccttagat
661 aaagacttca ggaagtatac tgcattcacc atacctagta taaacaatga gacaccaggg
721 ataagatatc agtacaatgt gcttccacag ggatggaaag gatcaccagc aatattccaa
781 agtagcatga caaaaatctt agagcctttc agaaaacaaa atccagatat agttatctat
841 caatacatgg atgatttgta tgtaggatct gacttagaaa taggacagca tagaacaaaa
901 atagaggaac tgagacaaca tctgttgaag tggggattta ccacaccaga taaaaaacat
961 cagaaagaac ctccatttct ttggatgggt tatgaactcc atcctgataa atggacagta
1021 cagcctatag tgctgccaga aaaggacagc tggactgtca atgacataca gaagttagtg
1081 ggaaaattga attgggcaag tcaaatatat tcagggatta aagtaaagca attatgtaaa
1141 ctcattaggg gaaccaaaac actaacagaa atagtaccac taacagaaga ggcagagcta
1201 gaactggcag aa
//
last modified: Tue May 31 10:56 2022