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LOCUS	    EU693622		    1182 bp    RNA     linear	VRL 02-JUN-2008
DEFINITION  HIV-1 isolate 91 from USA pol protein (pol) gene, partial cds
ACCESSION   EU693622
VERSION     EU693622.1 GI:189096790
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 1182)
            Show all sequences for reference 1
  AUTHORS   Little,S.J., Holte,S., Routy,J.P., Daar,E.S., Markowitz,M.,
	    Collier,A.C., Koup,R.A., Mellors,J.W., Connick,E., Conway,B.,
	    Kilby,M., Wang,L., Whitcomb,J.M., Hellmann,N.S. and Richman,D.D.
  TITLE     Antiretroviral-drug resistance among patients recently infected
	    with HIV
  JOURNAL   N. Engl. J. Med. 347 (6), 385-394 (2002)
  PUBMED    12167680
REFERENCE   2 (bases 1 to 1182)
            Show all sequences for reference 2
  AUTHORS   Little,S.J., Holte,S. and Richman,D.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-MAY-2008) Medicine and Pathology, University of
	    California, San Diego, UCSD Antiviral Research Center, 150 W.
	    Washington St., San Diego, CA 92103, USA
FEATURES             Location/Qualifiers
     source	     1..1182
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="91"
		     /isolation_source="acutely-infected patient"
		     /db_xref="taxon:11676"
		     /country="USA"
		     /collection_date="1996"
     gene	     <1..>1182
		     /gene="pol"
     CDS	     <1..>1182
		     /gene="pol"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="ACD76162.1"
		     /db_xref="GI:189096791"
		     /translation="PQITLWQRPLVTIKVGGQLKEALLDTGADDTVLEDINLPGKWKP
		     KMIGGIGGFIKVRQYDQVSIEICGHKAIGTVLVGPTPINIIGRNLLTQIGCTLNFPIS
		     PIETVPVKLKPGMDGPKVKQWPLTEEKIKALXEICTEMEKEEKISKIGPENPYNTPIF
		     AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSIP
		     LDPDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTRILEPFRKQNPD
		     IDIYQYMDDLYVGSDLEIGQHRAKIEDLRAHLLKWGLTTPDKKHQKEPPFLWMGYELH
		     PDKWTVQPITLPVKDSWTVNDIQKLVGKLNWASQIYAGIKVRQLCKLLRGTKALTEVV
		     PL"
BASE COUNT	469 a	 197 c	  240 g    275 t      1 other
ORIGIN
       1 cctcagatca ctctttggca acgaccccta gtcacaataa aggtaggggg acaactaaag 
      61 gaagctctat tagatacagg agcagatgat acagtattag aagacataaa tttgccagga 
     121 aaatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acagtatgat 
     181 caggtatcca tagaaatctg tggacataaa gctataggta cagtattagt aggaccgaca 
     241 cctatcaaca taattgggag aaatctgtta actcagattg gttgcacttt aaatttcccc 
     301 attagtccta ttgaaactgt accagtaaaa ttaaagccag gaatggatgg cccaaaagtt 
     361 aaacaatggc cattgacaga agaaaaaata aaagcattaa yagaaatatg tacagaaatg 
     421 gaaaaggaag aaaaaatttc aaaaattggg cctgaaaatc catacaatac tccaatattt 
     481 gccataaaga aaaaagacag tactaaatgg agaaaattag tagatttcag agaacttaat 
     541 aagagaactc aagacttctg ggaagttcaa ttaggaatac cacatcctgc agggttaaaa 
     601 aagaaaaaat cagtaacagt actggatgtg ggtgatgcat atttttcaat tcccttagac 
     661 ccagacttca ggaagtatac agcattcacc atacctagta taaacaatga gacaccaggg 
     721 attagatatc agtacaatgt gcttccacaa ggatggaagg gatcaccagc aatatttcaa 
     781 agcagtatga caagaatctt agagcctttt agaaaacaaa acccagacat agatatctat 
     841 caatacatgg atgatttgta tgtaggatct gacttagaaa tagggcagca tagagcaaaa 
     901 atagaggacc taagagcaca tctgttaaaa tggggattga ccacgccaga caaaaaacat 
     961 cagaaagagc ctccatttct ttggatgggt tatgaactcc atcctgataa atggacagta 
    1021 cagcctataa cactgccagt aaaagacagc tggactgtca atgacattca aaagttagta 
    1081 ggaaaattaa attgggcaag tcagatttat gcaggaatta aagtaaggca gttatgtaaa 
    1141 cttcttaggg gaaccaaagc actaacagaa gtagtgccac ta
//
last modified: Tue May 31 10:56 2022


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