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LOCUS EU693622 1182 bp RNA linear VRL 02-JUN-2008
DEFINITION HIV-1 isolate 91 from USA pol protein (pol) gene, partial cds
ACCESSION EU693622
VERSION EU693622.1 GI:189096790
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 1182)
Show all sequences for reference 1
AUTHORS Little,S.J., Holte,S., Routy,J.P., Daar,E.S., Markowitz,M.,
Collier,A.C., Koup,R.A., Mellors,J.W., Connick,E., Conway,B.,
Kilby,M., Wang,L., Whitcomb,J.M., Hellmann,N.S. and Richman,D.D.
TITLE Antiretroviral-drug resistance among patients recently infected
with HIV
JOURNAL N. Engl. J. Med. 347 (6), 385-394 (2002)
PUBMED 12167680
REFERENCE 2 (bases 1 to 1182)
Show all sequences for reference 2
AUTHORS Little,S.J., Holte,S. and Richman,D.D.
TITLE Direct Submission
JOURNAL Submitted (05-MAY-2008) Medicine and Pathology, University of
California, San Diego, UCSD Antiviral Research Center, 150 W.
Washington St., San Diego, CA 92103, USA
FEATURES Location/Qualifiers
source 1..1182
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="91"
/isolation_source="acutely-infected patient"
/db_xref="taxon:11676"
/country="USA"
/collection_date="1996"
gene <1..>1182
/gene="pol"
CDS <1..>1182
/gene="pol"
/codon_start="1"
/transl_table="1"
/product="pol protein"
/protein_id="ACD76162.1"
/db_xref="GI:189096791"
/translation="PQITLWQRPLVTIKVGGQLKEALLDTGADDTVLEDINLPGKWKP
KMIGGIGGFIKVRQYDQVSIEICGHKAIGTVLVGPTPINIIGRNLLTQIGCTLNFPIS
PIETVPVKLKPGMDGPKVKQWPLTEEKIKALXEICTEMEKEEKISKIGPENPYNTPIF
AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSIP
LDPDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTRILEPFRKQNPD
IDIYQYMDDLYVGSDLEIGQHRAKIEDLRAHLLKWGLTTPDKKHQKEPPFLWMGYELH
PDKWTVQPITLPVKDSWTVNDIQKLVGKLNWASQIYAGIKVRQLCKLLRGTKALTEVV
PL"
BASE COUNT 469 a 197 c 240 g 275 t 1 other
ORIGIN
1 cctcagatca ctctttggca acgaccccta gtcacaataa aggtaggggg acaactaaag
61 gaagctctat tagatacagg agcagatgat acagtattag aagacataaa tttgccagga
121 aaatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acagtatgat
181 caggtatcca tagaaatctg tggacataaa gctataggta cagtattagt aggaccgaca
241 cctatcaaca taattgggag aaatctgtta actcagattg gttgcacttt aaatttcccc
301 attagtccta ttgaaactgt accagtaaaa ttaaagccag gaatggatgg cccaaaagtt
361 aaacaatggc cattgacaga agaaaaaata aaagcattaa yagaaatatg tacagaaatg
421 gaaaaggaag aaaaaatttc aaaaattggg cctgaaaatc catacaatac tccaatattt
481 gccataaaga aaaaagacag tactaaatgg agaaaattag tagatttcag agaacttaat
541 aagagaactc aagacttctg ggaagttcaa ttaggaatac cacatcctgc agggttaaaa
601 aagaaaaaat cagtaacagt actggatgtg ggtgatgcat atttttcaat tcccttagac
661 ccagacttca ggaagtatac agcattcacc atacctagta taaacaatga gacaccaggg
721 attagatatc agtacaatgt gcttccacaa ggatggaagg gatcaccagc aatatttcaa
781 agcagtatga caagaatctt agagcctttt agaaaacaaa acccagacat agatatctat
841 caatacatgg atgatttgta tgtaggatct gacttagaaa tagggcagca tagagcaaaa
901 atagaggacc taagagcaca tctgttaaaa tggggattga ccacgccaga caaaaaacat
961 cagaaagagc ctccatttct ttggatgggt tatgaactcc atcctgataa atggacagta
1021 cagcctataa cactgccagt aaaagacagc tggactgtca atgacattca aaagttagta
1081 ggaaaattaa attgggcaag tcagatttat gcaggaatta aagtaaggca gttatgtaaa
1141 cttcttaggg gaaccaaagc actaacagaa gtagtgccac ta
//
last modified: Tue May 31 10:56 2022