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LOCUS EU693584 1212 bp RNA linear VRL 02-JUN-2008
DEFINITION HIV-1 isolate 7 from USA pol protein (pol) gene, partial cds
ACCESSION EU693584
VERSION EU693584.1 GI:189096714
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 1212)
Show all sequences for reference 1
AUTHORS Little,S.J., Holte,S., Routy,J.P., Daar,E.S., Markowitz,M.,
Collier,A.C., Koup,R.A., Mellors,J.W., Connick,E., Conway,B.,
Kilby,M., Wang,L., Whitcomb,J.M., Hellmann,N.S. and Richman,D.D.
TITLE Antiretroviral-drug resistance among patients recently infected
with HIV
JOURNAL N. Engl. J. Med. 347 (6), 385-394 (2002)
PUBMED 12167680
REFERENCE 2 (bases 1 to 1212)
Show all sequences for reference 2
AUTHORS Little,S.J., Holte,S. and Richman,D.D.
TITLE Direct Submission
JOURNAL Submitted (05-MAY-2008) Medicine and Pathology, University of
California, San Diego, UCSD Antiviral Research Center, 150 W.
Washington St., San Diego, CA 92103, USA
FEATURES Location/Qualifiers
source 1..1212
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="7"
/isolation_source="acutely-infected patient"
/db_xref="taxon:11676"
/country="USA"
/collection_date="1997"
gene <1..>1212
/gene="pol"
CDS <1..>1212
/gene="pol"
/codon_start="1"
/transl_table="1"
/product="pol protein"
/protein_id="ACD76124.1"
/db_xref="GI:189096715"
/translation="PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEDMELPGRWKP
KMIGGIGGFIKVRQYDQVSIEICGHKVIGTVLIGPTPVNIIGRNLLTQLGCTLNFPIS
PIETVPVRLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVF
AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
LDKEFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPD
IVIYQYMDDLYVGSDLEIGQHRAKIEELRQHLLKWGFTTPDKKHQKEPPFLWMGYELH
PDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYAGIKVRQLCKLLRGTKALTEVV
PLTKEAELELAE"
BASE COUNT 477 a 203 c 255 g 277 t
ORIGIN
1 cctcagatca ctctttggca acgacccctc gtcacaataa agataggggg gcaactaaag
61 gaagctctat tagatacagg agcagatgat acagtattag aagatatgga gttgccagga
121 aggtggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acagtatgat
181 caggtatcca tagaaatctg cggacataaa gttataggta cagtattaat aggacctaca
241 cctgtcaaca taattggaag aaatctgttg actcagcttg gctgcactct aaattttccc
301 attagtccta ttgaaactgt accagtaaga ttaaagccag gaatggatgg cccaaaagtt
361 aaacaatggc cattgacaga agaaaaaata aaagcattag tagaaatttg tacagaaatg
421 gaaaaggaag gaaaaatttc aaaaattggg cctgaaaacc catacaatac tccagtattt
481 gccataaaga aaaaagacag cactaaatgg agaaaattag tagacttcag agaacttaat
541 aaaagaactc aagacttctg ggaagttcaa ttaggaatac cacatcctgc agggttaaaa
601 aagaaaaaat cagtaacagt actggatgtg ggtgatgcat atttttcagt tcccttagat
661 aaagagttca ggaagtatac tgcatttacc atacctagta taaacaatga gacaccaggg
721 attagatatc agtacaatgt gcttccacag ggatggaaag gatcaccagc aatattccaa
781 agtagcatga caaaaatctt agagcctttt agaaaacaaa atccagacat agttatctat
841 caatacatgg atgatctgta tgtaggatct gacttagaaa tagggcagca tagagcaaaa
901 atagaggaac tgagacaaca tctattgaag tggggattta ccacaccaga caaaaaacat
961 caaaaagaac ctccattcct ttggatgggt tatgaactcc atcctgataa atggacagta
1021 caacctatag tactgccaga aaaggacagc tggactgtca atgacataca gaagttagtg
1081 ggaaaattga attgggcaag tcagatttat gcagggatta aagtaaggca attatgtaaa
1141 ctccttaggg gaaccaaagc actaacagaa gtagtaccac taacaaaaga agcagagcta
1201 gaactagcag aa
//
last modified: Tue May 31 10:56 2022